Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00528 ATGCTCTGCAAAAACAAGCCACCTCCCTCTGAGACTCTCGCTTGCAATACCTGTGCCACTCCCTGGCACGTTCCGTGCCTTCCCCTCCCTCCAACCACCCTTCTTTATTGGGACTGCCCTGATTGTTCCCACCTCGAACCCAACCATGTCGCCACCCCTACTCCGCCTCCCGGCGACCTCGTCTCCGTCATCCGTGCTATTCAGTCTGATACTTCACTCACAGAGGAAAAGAAGGCCAAGAAGCACCAGGAGCTTGTGGGTGGGTCCTCGAAGCCATCTGGTGATAAGAAGAACAATGGAAATGGGGGGATTGATATCTTCAATGGAAGCTTAAACAAGCTCCAGTCCTTTGACCAGAAGTTTGAGAACATGAATGAGGCCTTGAGACTGAGTTGTAAGAAAGGTTATCCAGTTCGTGTTGTCAGGTCCCACAAGGAGAAACGTTCATCATATGCACCAGATGCTGGAGTGCGATATGACGGGGTTTACAGAATATAG 498 0.51 MLCKNKPPPSETLACNTCATPWHVPCLPLPPTTLLYWDCPDCSHLEPNHVATPTPPPGDLVSVIRAIQSDTSLTEEKKAKKHQELVGGSSKPSGDKKNNGNGGIDIFNGSLNKLQSFDQKFENMNEALRLSCKKGYPVRVVRSHKEKRSSYAPDAGVRYDGVYRI* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00528 165 SUPERFAMILY FYVE/PHD zinc finger 2 47 IPR011011 -
Rops7g00528 165 SMART G9a_1 46 165 IPR003105 -
Rops7g00528 165 Pfam SAD/SRA domain 110 165 IPR003105 -
Rops7g00528 165 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 1 96 IPR045134 -
Rops7g00528 165 Gene3D - 93 165 IPR036987 -
Rops7g00528 165 ProSiteProfiles YDG domain profile. 43 165 IPR003105 -
Rops7g00528 165 SUPERFAMILY PUA domain-like 99 165 IPR015947 -
Rops7g00528 165 MobiDBLite consensus disorder prediction 72 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00528 Rops-Chr7 6804522 6805148 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00528 100 165 C2H2 Transcription Factor Family AT5G39550 73.134 3.49e-25 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00528 K10638 - gmx:100781044 113.235