Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00515 ATGTTAATGTCTTCCAACAAGAGAAAACTCTTGAGAACCCTTCTCAAAGCTAATGGAGGTTGTGGTTGTAGCAAACCAAAGCCCTCTGAGGTATACGACCCCACCCCAAAACCCAAAATCTCTATTTATGAAAACACAAACCCTAGCAGCCTCACTTCCTCCACCACAACTTCCGGCGATGGCAATGGGGACGACGAAGACTTCACTTCCACCACCATCTCCGAATCTGACACTCATCACGACCATAACAACAAAAGCATCACCAACAACAACAAGAAGAAGAATCATGGCATACCCAAACCGTGTCCAAAACTCATTAATAGCATCGCCATTGAGAAGGATTCAAAGGACCCACATAGAGATTTCAAGAATTCCATGCTCCAAATGATATTGGAGAGACAGATCTACTCAGAAAACGATCTTCAAGAGCTACTAGTATGCTTTCTTCAGCTGAATGCGCCGTGTCACCACCAAGTCATCGTTCAAGCCTTCATGGAGATCTGTGAAGAAACATTCCCTAAGAAGTTTGAAGATGATGGTGGTGGTGATGCTGAACCTTCTCGCAGGAACCACATCATTCGAAAGAGTCGGTGA 594 0.4461 MLMSSNKRKLLRTLLKANGGCGCSKPKPSEVYDPTPKPKISIYENTNPSSLTSSTTTSGDGNGDDEDFTSTTISESDTHHDHNNKSITNNNKKKNHGIPKPCPKLINSIAIEKDSKDPHRDFKNSMLQMILERQIYSENDLQELLVCFLQLNAPCHHQVIVQAFMEICEETFPKKFEDDGGGDAEPSRRNHIIRKSR* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00515 197 MobiDBLite consensus disorder prediction 40 69 - -
Rops7g00515 197 MobiDBLite consensus disorder prediction 175 197 - -
Rops7g00515 197 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 54 171 IPR038933 GO:0045892
Rops7g00515 197 Pfam Transcriptional repressor, ovate 115 170 IPR006458 -
Rops7g00515 197 ProSiteProfiles OVATE domain profile. 111 170 IPR006458 -
Rops7g00515 197 NCBIfam uncharacterized plant-specific domain TIGR01568 109 168 IPR006458 -
Rops7g00515 197 MobiDBLite consensus disorder prediction 72 88 - -
Rops7g00515 197 MobiDBLite consensus disorder prediction 17 103 - -
Rops7g00515 197 MobiDBLite consensus disorder prediction 175 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00515 Rops-Chr7 6642378 6643293 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Rops7g00515 Ovate 1.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00515 - - gmx:102670259 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00515 7 6642378 6643293 Rops7g00515 7 6642378 6643293 ECH
Rops7g00515 7 6642378 6643293 Rops3g01166 3 16411991 16412560 PCT