LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops7g00507	ATGGAGTCTCGAATGGATCAGTATGAGATCATGGAACAGATCGGTCGTGGTGCGTTTGGTGCTGCAATTCTCGTTAACCATAAGGCGGAGAAGAAGAAATATGTGTTGAAAAAAATCAGGCTGGCACGCCAGACTGAACGTTGCAGAAAATCTGCTCATCAAGAGATGGCTCTTATTGCTCGAATTCAGCACCCTTACATTGTGGAATTCAAGGAGGCTTGGGTTGAGAAGGGTTGCTACGTCTGCATTGTTACTGGATACTGTGAAGGTGGAGACATGGCTGCATTGATGAAAAAATCAAATGGGGTTTACTTTCCTGAGGAGAAACTCTGCAAATGGTTTACTCAATTACTGTTGGCAGTAGAATACCTGCATTCAAATTTTGTTTTACATCGTGACCTAAAGTGTTCCAACATCTTTCTTACCAAGGATCAGGATGTTCGCCTTGGGGATTTTGGGCTTGCTAAGACACTAAAAGCGGATGATTTGGCTTCTTCGGTGGTAGGAACTCCCAACTACATGTGTCCAGAACTGCTTGCGGATATTCCTTATGGTTTCAAATCTGATATTTGGTCACTAGGGTGTTGTATATATGAGATGGCTGCTCATCGCCCTGCTTTTAAAGCTTTTGATATGGCGGGATTGATAAGCAAGATAAATCGTTCCTCTATTGGTCCTTTGCCTCCCTGTTATTCCCCATTCTTGAAAACACTGATAAAGGGCATGCTGAGAAAAAATCCTGAGCATCGTCCAACGGCATCTGAAATCTTAAAGCACCCTTACTTGCAGCCTTATGTTCATCAATATTGTTCATCTTTCTGTCCTCCAACTGCCTGTTCTCCTGAAAAGCCAATTTCTGCTGTCCATGATCCTCGAAAAAATATGGCAGAAAGTCAAAACAGTAGTAGTTCGAGTAGTGAAAGAGGTAGTCTGATGCCAAATGAGAGAAACATTAGAAAAGCAGAGCCAAAGTGTGATAATAAAATCACTGAGATAGACCTGGCATCAATTGATGATGATGACTCTGAGCATCTCCTGCCCAGTGAAGAAGGAAATAGCTCAAGCAATGTCAATGCCAAAACAGATAAGCAGGAGGTTAGGAAGCAAACTCACAATGAACACCATTCTAATGTTGCATCTAAGCAACCAAAAACAATTAAGAATACGATGATGGTATTAAAAGATGAAAAAGTTAGAGAGGCAAGTTCTCCAATGAGAGGCAATCGCATAAAGGCAGGTGGTGTATCAAAACATAAAAAAAATACAGAGACATTGTCCAAATTGCCCAAACCTAGTTTTGGTGTTTCTGGTTTGAAGCCTAATTCAGAGGTGCCTACTATTGCACCTTCAAGAGCAACCCCTGATTCTGCAAAACGAATGCCGGGATCACATGCTTTGAAGCATCAGTTACCGATGATCGAATCTACACTAAAAACTAAACCTCGACATAATGTGACTCCACCATCTGGTCCTATCAAACAAGTAGAAGCAGGTGGAGTTCCTGTCAAGCCAAAGCAAAAGAATCCTCCAAGCTTACTTAAACCGCCTTCATTTCCAGGACTTGTGAGGCAGGCTGGGCTTGATGTTCGAAATGCAGCAGCTGATACAGGAAAGTTAATTCCAAATAAAATTGCTCAGGAGCCTAGGATGAGCCATCATCAGTTGACCAATGGTCATCTACCACATGTTTCTAGAGAGATTACTAGAGAGCCTTCAAAGGCTTTTGAAAGTAGTTCCAAAGGCATGCAAACAGACAGCAGCAATTCTGTCTCATCTTCGGTCTCTATTCAAGGATTTGAACTTTCTGACTTTGCAACCACTTTTATTGACTTGAGTGAACCAATACTTCCTGTTCACGAGAGTCTAAACCACAATGAAAAGGTGGAATCACATCCAGATAGCCATTCCCCTGCTGGAAAATTGTCTGGGGAAACCTCTCTGTTTACACCAAATTTTAAGGATACAATTATTAGTAATGAGAAGGTAAGTCCCAATTTAACCCTCGATCACTCTGTTCAAGATTCCAAGGTAATGTTTGCTTCTGATGATAGTTTTCTAAAAAATCAGACAACTACATCTACTGCCTCCGGGTATGATAATAGATCTCTAGATCCCTCTGCTGAAGTCACACAAGAAATCAAGGACCTTCAAGATATTTCTATGGAAATGACTTCAACACCGTCTCTCAAATATCCTCTCCCCATTTCTGGTGAAAAGTCTGATTGTGATGCTAGTCCAGCAAGCCAGCTAAATAATAGGCCTGATAAAGTTAGCCAGTCAAAACTATCGTGCATCTCCATCAATGATGACAAATTCATGGTAAGGGAAAGACTGTCACCAGTTGCTGAAACTGCTCCGATTATCTCTACTAAAATTTCAAGCCAGAAAGTTTTAAAAGAGAAAGGAACAGCTCTACAGAATCCAGCACCAGAAAGGCCAGCTCCTGGCCATCTTCCTCCAGCTTTTGATGATGTCATTCATGTAATACGCCATAGCACTTACCGTCTGGCGAGTGAGCTGCCAGTGAAGGAATCTGTGGAGATGGGAGTTCAAAATGTAGATGTTGGTAAATTTATCAGCATTGCCAGGGATGATTTAGAAATGAAAAACACGAGCACTCCCTTGACCCTTAAATCTTCAAATTGCTCTGAAGCTACTAGATTGAAGTCAAACATTTCTGATAATTTGGAAATTAGAAACTTGAGCACTCCTCCTAAATTTAAATCTGCAAGTTGCTCTGACTCTTTGAGCTCAAAATTAAGTATCTCAGACCATCCTGATGTTAAGGAACAAGATGTGAAAAAACCTGATTCTCTCGTTTCAAAATCTGATTCCACTGACTATACCACACATAACCCTCCTACAGCCAAAGAGGAAACACCAGCAAAGGAAACATTGGATGTTAAATCTTCCAGCCAAAGAGCTGAGGCACTTGAAGGGCTGTTAGAATTGTCTGCAGATTTGCTGCAGCAAAATAGATTGGAGGAACTTGCAGTTGTTTTGAAGCCATTTGGAAAAGATAAGGTTTCCCCAAGGGAGACAGCCATTTGGTTAGCCAAAAGTCTAAAAGGATTGATGATTGAGGAAAGTGGGGGACGCTGTTAA	3105	0.4135	MESRMDQYEIMEQIGRGAFGAAILVNHKAEKKKYVLKKIRLARQTERCRKSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAALMKKSNGVYFPEEKLCKWFTQLLLAVEYLHSNFVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPFLKTLIKGMLRKNPEHRPTASEILKHPYLQPYVHQYCSSFCPPTACSPEKPISAVHDPRKNMAESQNSSSSSSERGSLMPNERNIRKAEPKCDNKITEIDLASIDDDDSEHLLPSEEGNSSSNVNAKTDKQEVRKQTHNEHHSNVASKQPKTIKNTMMVLKDEKVREASSPMRGNRIKAGGVSKHKKNTETLSKLPKPSFGVSGLKPNSEVPTIAPSRATPDSAKRMPGSHALKHQLPMIESTLKTKPRHNVTPPSGPIKQVEAGGVPVKPKQKNPPSLLKPPSFPGLVRQAGLDVRNAAADTGKLIPNKIAQEPRMSHHQLTNGHLPHVSREITREPSKAFESSSKGMQTDSSNSVSSSVSIQGFELSDFATTFIDLSEPILPVHESLNHNEKVESHPDSHSPAGKLSGETSLFTPNFKDTIISNEKVSPNLTLDHSVQDSKVMFASDDSFLKNQTTTSTASGYDNRSLDPSAEVTQEIKDLQDISMEMTSTPSLKYPLPISGEKSDCDASPASQLNNRPDKVSQSKLSCISINDDKFMVRERLSPVAETAPIISTKISSQKVLKEKGTALQNPAPERPAPGHLPPAFDDVIHVIRHSTYRLASELPVKESVEMGVQNVDVGKFISIARDDLEMKNTSTPLTLKSSNCSEATRLKSNISDNLEIRNLSTPPKFKSASCSDSLSSKLSISDHPDVKEQDVKKPDSLVSKSDSTDYTTHNPPTAKEETPAKETLDVKSSSQRAEALEGLLELSADLLQQNRLEELAVVLKPFGKDKVSPRETAIWLAKSLKGLMIEESGGRC*	1035

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops7g00507	1034	SUPERFAMILY	Protein kinase-like (PK-like)	4	308	IPR011009	-
	Rops7g00507	1034	ProSitePatterns	Protein kinases ATP-binding region signature.	14	37	IPR017441	GO:0005524
	Rops7g00507	1034	MobiDBLite	consensus disorder prediction	574	589	-	-
	Rops7g00507	1034	MobiDBLite	consensus disorder prediction	480	516	-	-
	Rops7g00507	1034	MobiDBLite	consensus disorder prediction	942	956	-	-
	Rops7g00507	1034	SMART	serkin_6	8	262	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Rops7g00507	1034	MobiDBLite	consensus disorder prediction	731	755	-	-
	Rops7g00507	1034	MobiDBLite	consensus disorder prediction	313	342	-	-
	Rops7g00507	1034	MobiDBLite	consensus disorder prediction	293	312	-	-
	Rops7g00507	1034	ProSiteProfiles	Protein kinase domain profile.	8	262	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops7g00507	Rops-Chr7	6548369	6555729	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops7g00507	14	263	MAP Kinase Kinase Kinase	AT1G53570	32.157	2.96e-36	143

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	NEK	Rops7g00507		Pkinase	3.3e-65	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops7g00507	K08857		-	gmx:100818943	1557.73

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Rops7g00507	7	6548369	6555729	Rops7g00507	7	6548369	6555729	ECH
	Rops7g00507	7	6548369	6555729	Rops3g01172	3	16489782	16496886	PCT

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