Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops7g00507 | ATGGAGTCTCGAATGGATCAGTATGAGATCATGGAACAGATCGGTCGTGGTGCGTTTGGTGCTGCAATTCTCGTTAACCATAAGGCGGAGAAGAAGAAATATGTGTTGAAAAAAATCAGGCTGGCACGCCAGACTGAACGTTGCAGAAAATCTGCTCATCAAGAGATGGCTCTTATTGCTCGAATTCAGCACCCTTACATTGTGGAATTCAAGGAGGCTTGGGTTGAGAAGGGTTGCTACGTCTGCATTGTTACTGGATACTGTGAAGGTGGAGACATGGCTGCATTGATGAAAAAATCAAATGGGGTTTACTTTCCTGAGGAGAAACTCTGCAAATGGTTTACTCAATTACTGTTGGCAGTAGAATACCTGCATTCAAATTTTGTTTTACATCGTGACCTAAAGTGTTCCAACATCTTTCTTACCAAGGATCAGGATGTTCGCCTTGGGGATTTTGGGCTTGCTAAGACACTAAAAGCGGATGATTTGGCTTCTTCGGTGGTAGGAACTCCCAACTACATGTGTCCAGAACTGCTTGCGGATATTCCTTATGGTTTCAAATCTGATATTTGGTCACTAGGGTGTTGTATATATGAGATGGCTGCTCATCGCCCTGCTTTTAAAGCTTTTGATATGGCGGGATTGATAAGCAAGATAAATCGTTCCTCTATTGGTCCTTTGCCTCCCTGTTATTCCCCATTCTTGAAAACACTGATAAAGGGCATGCTGAGAAAAAATCCTGAGCATCGTCCAACGGCATCTGAAATCTTAAAGCACCCTTACTTGCAGCCTTATGTTCATCAATATTGTTCATCTTTCTGTCCTCCAACTGCCTGTTCTCCTGAAAAGCCAATTTCTGCTGTCCATGATCCTCGAAAAAATATGGCAGAAAGTCAAAACAGTAGTAGTTCGAGTAGTGAAAGAGGTAGTCTGATGCCAAATGAGAGAAACATTAGAAAAGCAGAGCCAAAGTGTGATAATAAAATCACTGAGATAGACCTGGCATCAATTGATGATGATGACTCTGAGCATCTCCTGCCCAGTGAAGAAGGAAATAGCTCAAGCAATGTCAATGCCAAAACAGATAAGCAGGAGGTTAGGAAGCAAACTCACAATGAACACCATTCTAATGTTGCATCTAAGCAACCAAAAACAATTAAGAATACGATGATGGTATTAAAAGATGAAAAAGTTAGAGAGGCAAGTTCTCCAATGAGAGGCAATCGCATAAAGGCAGGTGGTGTATCAAAACATAAAAAAAATACAGAGACATTGTCCAAATTGCCCAAACCTAGTTTTGGTGTTTCTGGTTTGAAGCCTAATTCAGAGGTGCCTACTATTGCACCTTCAAGAGCAACCCCTGATTCTGCAAAACGAATGCCGGGATCACATGCTTTGAAGCATCAGTTACCGATGATCGAATCTACACTAAAAACTAAACCTCGACATAATGTGACTCCACCATCTGGTCCTATCAAACAAGTAGAAGCAGGTGGAGTTCCTGTCAAGCCAAAGCAAAAGAATCCTCCAAGCTTACTTAAACCGCCTTCATTTCCAGGACTTGTGAGGCAGGCTGGGCTTGATGTTCGAAATGCAGCAGCTGATACAGGAAAGTTAATTCCAAATAAAATTGCTCAGGAGCCTAGGATGAGCCATCATCAGTTGACCAATGGTCATCTACCACATGTTTCTAGAGAGATTACTAGAGAGCCTTCAAAGGCTTTTGAAAGTAGTTCCAAAGGCATGCAAACAGACAGCAGCAATTCTGTCTCATCTTCGGTCTCTATTCAAGGATTTGAACTTTCTGACTTTGCAACCACTTTTATTGACTTGAGTGAACCAATACTTCCTGTTCACGAGAGTCTAAACCACAATGAAAAGGTGGAATCACATCCAGATAGCCATTCCCCTGCTGGAAAATTGTCTGGGGAAACCTCTCTGTTTACACCAAATTTTAAGGATACAATTATTAGTAATGAGAAGGTAAGTCCCAATTTAACCCTCGATCACTCTGTTCAAGATTCCAAGGTAATGTTTGCTTCTGATGATAGTTTTCTAAAAAATCAGACAACTACATCTACTGCCTCCGGGTATGATAATAGATCTCTAGATCCCTCTGCTGAAGTCACACAAGAAATCAAGGACCTTCAAGATATTTCTATGGAAATGACTTCAACACCGTCTCTCAAATATCCTCTCCCCATTTCTGGTGAAAAGTCTGATTGTGATGCTAGTCCAGCAAGCCAGCTAAATAATAGGCCTGATAAAGTTAGCCAGTCAAAACTATCGTGCATCTCCATCAATGATGACAAATTCATGGTAAGGGAAAGACTGTCACCAGTTGCTGAAACTGCTCCGATTATCTCTACTAAAATTTCAAGCCAGAAAGTTTTAAAAGAGAAAGGAACAGCTCTACAGAATCCAGCACCAGAAAGGCCAGCTCCTGGCCATCTTCCTCCAGCTTTTGATGATGTCATTCATGTAATACGCCATAGCACTTACCGTCTGGCGAGTGAGCTGCCAGTGAAGGAATCTGTGGAGATGGGAGTTCAAAATGTAGATGTTGGTAAATTTATCAGCATTGCCAGGGATGATTTAGAAATGAAAAACACGAGCACTCCCTTGACCCTTAAATCTTCAAATTGCTCTGAAGCTACTAGATTGAAGTCAAACATTTCTGATAATTTGGAAATTAGAAACTTGAGCACTCCTCCTAAATTTAAATCTGCAAGTTGCTCTGACTCTTTGAGCTCAAAATTAAGTATCTCAGACCATCCTGATGTTAAGGAACAAGATGTGAAAAAACCTGATTCTCTCGTTTCAAAATCTGATTCCACTGACTATACCACACATAACCCTCCTACAGCCAAAGAGGAAACACCAGCAAAGGAAACATTGGATGTTAAATCTTCCAGCCAAAGAGCTGAGGCACTTGAAGGGCTGTTAGAATTGTCTGCAGATTTGCTGCAGCAAAATAGATTGGAGGAACTTGCAGTTGTTTTGAAGCCATTTGGAAAAGATAAGGTTTCCCCAAGGGAGACAGCCATTTGGTTAGCCAAAAGTCTAAAAGGATTGATGATTGAGGAAAGTGGGGGACGCTGTTAA | 3105 | 0.4135 | MESRMDQYEIMEQIGRGAFGAAILVNHKAEKKKYVLKKIRLARQTERCRKSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAALMKKSNGVYFPEEKLCKWFTQLLLAVEYLHSNFVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPFLKTLIKGMLRKNPEHRPTASEILKHPYLQPYVHQYCSSFCPPTACSPEKPISAVHDPRKNMAESQNSSSSSSERGSLMPNERNIRKAEPKCDNKITEIDLASIDDDDSEHLLPSEEGNSSSNVNAKTDKQEVRKQTHNEHHSNVASKQPKTIKNTMMVLKDEKVREASSPMRGNRIKAGGVSKHKKNTETLSKLPKPSFGVSGLKPNSEVPTIAPSRATPDSAKRMPGSHALKHQLPMIESTLKTKPRHNVTPPSGPIKQVEAGGVPVKPKQKNPPSLLKPPSFPGLVRQAGLDVRNAAADTGKLIPNKIAQEPRMSHHQLTNGHLPHVSREITREPSKAFESSSKGMQTDSSNSVSSSVSIQGFELSDFATTFIDLSEPILPVHESLNHNEKVESHPDSHSPAGKLSGETSLFTPNFKDTIISNEKVSPNLTLDHSVQDSKVMFASDDSFLKNQTTTSTASGYDNRSLDPSAEVTQEIKDLQDISMEMTSTPSLKYPLPISGEKSDCDASPASQLNNRPDKVSQSKLSCISINDDKFMVRERLSPVAETAPIISTKISSQKVLKEKGTALQNPAPERPAPGHLPPAFDDVIHVIRHSTYRLASELPVKESVEMGVQNVDVGKFISIARDDLEMKNTSTPLTLKSSNCSEATRLKSNISDNLEIRNLSTPPKFKSASCSDSLSSKLSISDHPDVKEQDVKKPDSLVSKSDSTDYTTHNPPTAKEETPAKETLDVKSSSQRAEALEGLLELSADLLQQNRLEELAVVLKPFGKDKVSPRETAIWLAKSLKGLMIEESGGRC* | 1035 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops7g00507 | 1034 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 308 | IPR011009 | - | |
Rops7g00507 | 1034 | ProSitePatterns | Protein kinases ATP-binding region signature. | 14 | 37 | IPR017441 | GO:0005524 | |
Rops7g00507 | 1034 | MobiDBLite | consensus disorder prediction | 574 | 589 | - | - | |
Rops7g00507 | 1034 | MobiDBLite | consensus disorder prediction | 480 | 516 | - | - | |
Rops7g00507 | 1034 | MobiDBLite | consensus disorder prediction | 942 | 956 | - | - | |
Rops7g00507 | 1034 | SMART | serkin_6 | 8 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops7g00507 | 1034 | MobiDBLite | consensus disorder prediction | 731 | 755 | - | - | |
Rops7g00507 | 1034 | MobiDBLite | consensus disorder prediction | 313 | 342 | - | - | |
Rops7g00507 | 1034 | MobiDBLite | consensus disorder prediction | 293 | 312 | - | - | |
Rops7g00507 | 1034 | ProSiteProfiles | Protein kinase domain profile. | 8 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops7g00507 | 1034 | FunFam | Serine/threonine-protein kinase Nek2 | 5 | 87 | - | - | |
Rops7g00507 | 1034 | CDD | STKc_Nek | 7 | 262 | - | - | |
Rops7g00507 | 1034 | MobiDBLite | consensus disorder prediction | 399 | 464 | - | - | |
Rops7g00507 | 1034 | MobiDBLite | consensus disorder prediction | 361 | 380 | - | - | |
Rops7g00507 | 1034 | FunFam | Serine/threonine-protein kinase Nek5 | 90 | 335 | - | - | |
Rops7g00507 | 1034 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 129 | 141 | IPR008271 | GO:0004672|GO:0006468 | |
Rops7g00507 | 1034 | MobiDBLite | consensus disorder prediction | 918 | 968 | - | - | |
Rops7g00507 | 1034 | Gene3D | Transferase(Phosphotransferase) domain 1 | 90 | 337 | - | - | |
Rops7g00507 | 1034 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 87 | - | - | |
Rops7g00507 | 1034 | MobiDBLite | consensus disorder prediction | 285 | 382 | - | - | |
Rops7g00507 | 1034 | Pfam | Protein kinase domain | 8 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops7g00507 | 1034 | MobiDBLite | consensus disorder prediction | 570 | 589 | - | - | |
Rops7g00507 | 1034 | MobiDBLite | consensus disorder prediction | 923 | 941 | - | - | |
Rops7g00507 | 1034 | PANTHER | SERINE/THREONINE-PROTEIN KINASE NEK | 5 | 983 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops7g00507 | Rops-Chr7 | 6548369 | 6555729 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops7g00507 | 14 | 263 | MAP Kinase Kinase Kinase | AT1G53570 | 32.157 | 2.96e-36 | 143 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | NEK | Rops7g00507 | Pkinase | 3.3e-65 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops7g00507 | K08857 | - | gmx:100818943 | 1557.73 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Rops7g00507 | 7 | 6548369 | 6555729 | Rops7g00507 | 7 | 6548369 | 6555729 | ECH | |
Rops7g00507 | 7 | 6548369 | 6555729 | Rops3g01172 | 3 | 16489782 | 16496886 | PCT |