Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00503 ATGGAAGGTATCCAGATAGAAGAAGTCTCCATCTTGCTCTTTTTTGGTCTAATCATTACAATGGGTTATGGTGCTACAAACCCAAATGATCTCAAAGTTCTGGATGATTTCAGAAAAGGATTGGAGAATCCAGAGCTTCTGAAATGGCCAGAAAATGGAGATGATCCATGTGGCCCTCCTTCATGGCCTTATGTGTCCTGTGTTGGAGACAGAGTCACTCAAATTCAGGCCAAGAATCTGGGTCTTAAAGGATCATTACCTCAAAACTTTAACCAACTCTCAGAACTCTACAATTTAGGCCTTCAACGCAACAACCTTAGTGGCATGTTGCCTACTTTTAGTGGATTATCCAAATTGGAATTTGCTTTCTTGGACTACAATGCATTTGATGCTATCCCATCTGATTTCTTTAATGGACTCAGCAGCCTTAGGGTCTTGTCTTTGGAAGAAAATCAACTGAATGTGAGTAGTGGCTGGTCATTTCCTATGGATTTAGAAAAGTCAGTGCAATTGACAAATCTTTCTCTGGTGCATTGTAATTTGGTTGGAACATTGCCAGATTTTTTAGGTAGATTGCCATCCCTCACAAGTCTCAGGCTTTCAGGAAACAGACTTTCTGGTACTATTCCAGCTACTTTTGCTCAATCATCAATCCAGGTTTTGTGGTTGAATAATCAAGAAGGTGGTGGGTTGACTGGTCCTATTGATGTTATTGCTTCAATGGTTTTCCTAAGACAGCTTTGGCTACATGGAAACCAGTTCACTGGGACAATTCCAGAGAATATTGGAAATCTTACTTCCTTGAAGGAACTCAACCTCAATAGTAATCAACTTGTTGGTTTGATTCCAGAGTCCCTAGCACACATGGACCTCAAGATACTGGTGCTGAATAATAACATGCTAATGGGTCCAATACCAAAGTTTAAAGCTGCCAATTTTTCTTATGATGACAATTTGTTTTGTCAACCTGAACTTGGACTTGAATGTGCCCCTGAAGTTACCGCACTGCTGGATTTTCTGGATAATCTGAATTACCCATCATTTCTCATTTCTGATTGGTCAGGTGATAAACCATGCACAGCCAGCACAGGGCCATGGTTTGGATTGAGCTGCAATTCCAACTCAGAGGTATCTATAATCAATCTACCCAGACACAAGCTGAACGGTACTCTTAGTCCCTCACTTTCTAAGTTAGGTTCACTCCTTGAAATTAGGCTCGCAGGAAATAATATAAGTGGCACAGTTCATAGTGATTTTACTAAAATGAAATCTTTAAGGTTGTTGGATTTAAGTGATAACAATCTTGAGCCTCCATTGCCAAACTTTCATGATGTCAAATTTATCAGTGTGGGTAACCCTCTTCTTCCTAATCAAACTGGAGGGAGTCCCATGCCTATTAACAGCCCACCTTCACCACACAACCCATCAAGTCCTCCATCCTCTCATAAGGTGCCTTTTCCAAGTCAAAGTTCAAGCTCAGATCAATCAAAACCAAATGAATTCAAAAGATTCAAAACAGTAGCAATAGTGGCTGGAGTTGCTGTGTTTGCAATTGTAGCTTTTTTGGTTGTTTATCTCTTCATATGTTGCTATAAGAACAAAAAAGCCTCCTTGGATGCTCCAAGTTCCATTGTGGTTCACCCTCGAGATCCATCTGATCCAGATAATATGGTTAAAATTGCAGTTTCAAGCAACACCACAAGAAGCTTATCAGCAAAGACTGAGACAAGTTCTGCGAGTAACATTAGTGGTGAAACTCAAAACTCTCATGTAATTGAGGCTGGCAACTTAGTCATCTCTGTACAAGTACTACGCAAGGTTACCAAGGATTTTGCTTCAGAAAATGAGCTAGGCCGTGGTGGGTTTGGAACTGTTTACAAGGGGGAACTAGAAGATGGGACAAAAATAGCAGTGAAGAGAATGGAGCATGGTGTTATTAGCAGAAAGGCACTGGAGGAGTTTGAAGCTGAAATAGCTGTTCTTTCCAAGGTTCGTCACAGACATCTGGTATCCCTATTGGGGTATTCCATAGAAGGCAATGAAAGACTTTTGGTTTATGAATATATGCCTCTTGGTGCTCTAAGCCAGCATCTTTTTCATTGGAAAAGCTTGAAATTGGAGCCTTTGTCTTGGTCACAGAGGCTTGCAGTAGCACTAGATGTTGCTAGAGGGATGGAATACCTTCATGGTCTTGCCCGCGAGACCTTTATCCATCGAGATCTTAAGTCTTCTAATATTCTACTTGGTGATGATTTTCGGGCAAAAGTTTCAGATTTTGGTCTGGTAAAGCTTGCCCCGGATGGTGACAAGTCTATAGTAACCAAGCTTGCCGGGACATTTGGATACCTTGCCCCTGAATATGCAGTGATGGGGAAAATCACCACAAAAGCTGATGTCTTCAGTTATGGTGTGGTGTTAATGGAACTTCTGACTGGACTAATGGCACTTGATGAGAGTAGACCAGAGGAAAGCCGGTACTTGGCTGAATGGTTTTGGCGCATTAAATCGAGCAAAGAAAAGCTTATGGCAGCCATTGATCCAGTTCTGGAAGCAACTGAAGAGACTTTTGAGAGTATAACCATTGTAGCTGAACTTGCTGGACATTGCACAGCTAGGGAAGCAAATCATAGGCCAGATATGAGTCATGTAGTGAATGTACTAGCAGCATTAGTGGAAAAATGGAGACCAGTTGATGATGAATTTGATTATTACTCTGGCATTGACTCCACTCGACCCCTTCCCCAAATGTTGAAAATTTGGAAGGAAGCAGAAAGCAAAGAGTTTAGCTATGCTGCTAGTCTTGAAGACAGCAGAAGCAGTATTGCAGCTAGGCCTACTGGATTTGCAGACTCTTTTACTTCTGCTGATGCCCGATGA 2877 0.4154 MEGIQIEEVSILLFFGLIITMGYGATNPNDLKVLDDFRKGLENPELLKWPENGDDPCGPPSWPYVSCVGDRVTQIQAKNLGLKGSLPQNFNQLSELYNLGLQRNNLSGMLPTFSGLSKLEFAFLDYNAFDAIPSDFFNGLSSLRVLSLEENQLNVSSGWSFPMDLEKSVQLTNLSLVHCNLVGTLPDFLGRLPSLTSLRLSGNRLSGTIPATFAQSSIQVLWLNNQEGGGLTGPIDVIASMVFLRQLWLHGNQFTGTIPENIGNLTSLKELNLNSNQLVGLIPESLAHMDLKILVLNNNMLMGPIPKFKAANFSYDDNLFCQPELGLECAPEVTALLDFLDNLNYPSFLISDWSGDKPCTASTGPWFGLSCNSNSEVSIINLPRHKLNGTLSPSLSKLGSLLEIRLAGNNISGTVHSDFTKMKSLRLLDLSDNNLEPPLPNFHDVKFISVGNPLLPNQTGGSPMPINSPPSPHNPSSPPSSHKVPFPSQSSSSDQSKPNEFKRFKTVAIVAGVAVFAIVAFLVVYLFICCYKNKKASLDAPSSIVVHPRDPSDPDNMVKIAVSSNTTRSLSAKTETSSASNISGETQNSHVIEAGNLVISVQVLRKVTKDFASENELGRGGFGTVYKGELEDGTKIAVKRMEHGVISRKALEEFEAEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPLGALSQHLFHWKSLKLEPLSWSQRLAVALDVARGMEYLHGLARETFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDGDKSIVTKLAGTFGYLAPEYAVMGKITTKADVFSYGVVLMELLTGLMALDESRPEESRYLAEWFWRIKSSKEKLMAAIDPVLEATEETFESITIVAELAGHCTAREANHRPDMSHVVNVLAALVEKWRPVDDEFDYYSGIDSTRPLPQMLKIWKEAESKEFSYAASLEDSRSSIAARPTGFADSFTSADAR* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00503 958 MobiDBLite consensus disorder prediction 458 498 - -
Rops7g00503 958 Pfam Protein tyrosine and serine/threonine kinase 614 887 IPR001245 GO:0004672|GO:0006468
Rops7g00503 958 FunFam receptor protein kinase TMK1 689 906 - -
Rops7g00503 958 SMART serkin_6 611 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00503 958 FunFam Receptor-like kinase TMK4 28 326 - -
Rops7g00503 958 FunFam Leucine-rich repeat receptor-like kinase 331 458 - -
Rops7g00503 958 ProSitePatterns Protein kinases ATP-binding region signature. 617 639 IPR017441 GO:0005524
Rops7g00503 958 MobiDBLite consensus disorder prediction 463 482 - -
Rops7g00503 958 CDD STKc_IRAK 617 887 - -
Rops7g00503 958 PANTHER OSJNBA0070M12.3 PROTEIN 12 958 - -
Rops7g00503 958 Gene3D Transferase(Phosphotransferase) domain 1 689 903 - -
Rops7g00503 958 ProSiteProfiles Protein kinase domain profile. 611 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00503 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 736 748 IPR008271 GO:0004672|GO:0006468
Rops7g00503 958 Pfam Leucine rich repeat N-terminal domain 331 372 IPR013210 -
Rops7g00503 958 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Rops7g00503 958 Gene3D Phosphorylase Kinase; domain 1 570 688 - -
Rops7g00503 958 MobiDBLite consensus disorder prediction 483 497 - -
Rops7g00503 958 SUPERFAMILY L domain-like 331 441 - -
Rops7g00503 958 SUPERFAMILY Protein kinase-like (PK-like) 589 887 IPR011009 -
Rops7g00503 958 Gene3D Ribonuclease Inhibitor 28 324 IPR032675 -
Rops7g00503 958 Gene3D Ribonuclease Inhibitor 331 455 IPR032675 -
Rops7g00503 958 FunFam receptor protein kinase TMK1 573 688 - -
Rops7g00503 958 SMART LRR_typ_2 140 163 IPR003591 -
Rops7g00503 958 SMART LRR_typ_2 422 444 IPR003591 -
Rops7g00503 958 SMART LRR_typ_2 398 421 IPR003591 -
Rops7g00503 958 SMART LRR_typ_2 265 288 IPR003591 -
Rops7g00503 958 SMART LRR_typ_2 241 264 IPR003591 -
Rops7g00503 958 SMART LRR_typ_2 116 139 IPR003591 -
Rops7g00503 958 SMART LRR_typ_2 93 115 IPR003591 -
Rops7g00503 958 SMART LRR_typ_2 192 215 IPR003591 -
Rops7g00503 958 SUPERFAMILY L domain-like 27 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00503 Rops-Chr7 6509600 6513050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00503 84 884 Receptor kinase-like Gene Family AT1G55610 30.706 6.66e-82 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Rops7g00503 PK_Tyr_Ser-Thr 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00503 - - gmx:100785090 1571.21