Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00488 ATGATTCCACCAACAGCTGCAGACCCTCACATTGCCAAATCTAAGATTGCTGCCATGGACCTCAAGTCCATGATCAAGACAGGATTGTGGGAAGACACCAATCTCTTGGAGGTTATTCCTGTTGTGACTGTAGCTTCCCTGTTGATTGAAGTGGTTTTTAGCACTGAGAGACTCGCTAAGACAATACAAGAACTATCCACCCTAGCCAAATTTAAGAACAAGGATAGTAAAGTTGCAGTAGAGAATCCAGAGAGTCCTCATCAAGAGAAAGCTCCACAACCAAGTTATGCTGACAATAATGAACCTCATCATGTGGCGGTCCAGGCTGAACAAATGGGGTTTTCTCCCAAGATTTTGGTCCTTGTGATGGCTGGATGTAGTGTTTATATGTCTCATTATAGGACCTCATTGTCAACCAGTCGTGACAATAGTCCTCAGGTTTGTGATTCTTGTATGCAATTGCTGCTACAACATGCATACATGACATACTAG 492 0.4309 MIPPTAADPHIAKSKIAAMDLKSMIKTGLWEDTNLLEVIPVVTVASLLIEVVFSTERLAKTIQELSTLAKFKNKDSKVAVENPESPHQEKAPQPSYADNNEPHHVAVQAEQMGFSPKILVLVMAGCSVYMSHYRTSLSTSRDNSPQVCDSCMQLLLQHAYMTY* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00488 163 MobiDBLite consensus disorder prediction 77 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00488 Rops-Chr7 6190056 6192072 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00488 1 105 Miscellaneous Gene Families AT1G08430 33.962 2.61e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00488 K25841 - gmx:100787221 138.272
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00488 7 6190056 6192072 Rops7g00488 7 6190056 6192072 ECH
Rops7g00488 7 6190056 6192072 Rops3g01178 3 16594058 16601203 PCT