Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00486 ATGGGTTTTTTGTTGAAAGAAGTTTTGAAGACTCTGTGCGGTCGGAATCAGTGGTCTTATGCGGTGTTCTGGAAGATCGGTTGCCACAATTCAAAGCTATTAATCTGGGAAGAATGCTACTATGAACCTTTGCCATGTTTTTTCCCTCCAAGCAATTTTGGGACGTCTAATTTGCCTTACCAGAATGGGGAAGGAAGCTGGTTTGCTTCGGAGTCTCAGTTGCCTCAGCTAGGGATTCAAGAAGACAGAATCTTTTCTTTAATTAACAAAATGAATGTAAATAATTCAGTCATTGTTGCAGGTGAAGGTATAATTGGAAGGGCTGCATTTACAGGCAGCCATCAGTGGCTTCTTTTGAACAATTTCACTAAAGATGTATATCCACCTGAGGTATATGCTGAAGTGCATCGCCAATATTCAGCTGGAATGCAGACAGTAGCAGTTATTCCTGTGCTTCCTCATGGGGTTGTTCAACTTGGTTCTTTATTGCCGATAATGGAAAATATGGGATTTGTGAATGATGTGAAGGGCTTGATATTGCAATTGGGGTGTGTTCCTGGTGCTCTTCTATCTGAAAACTATTCAGCAAAACTTTCAAATGAAAGACTTGCTGGACCTACTGCTGCTGGTGTCCCTGTGTCTGTTGATCCACCAGTCATCACCTCGATTCACACTCCCTCAGTAGTTAATGGCTCCAATCAGCAAAGTAATTCATCTCATATTTCAAGGCCTGTTGTTCAAACACCTTGTCTTCTGAGGGGAGAAATAAATACTTGCCAGGGTTCTGAATTGGCACCCCAAATCCATAACTTGAACCAGATATCCAATAACCTTTGCCAAGCGAAGTTAACTCCCATGAGTAAAACAAACTTTGCTGGCCAACGAGATAATAGAGTTGTGGAGGCTGAAGTGATACCCTCAAATCTCAGTTCATACCTGCAACAGCATTCTGTTTCATTTAATGCAAGATCTGCTGCATTCAATAACTTACTTAGTTCTGGGCCTTTTGGCCAATCAGGTCTAAATAGTCAAAAATATATGGAACAACAAATCCTATCAGCCATTGGGAGTCAAGATCATGTTAATCCTTGTATTAATGCATCACGTACCTTAAACATGTCTCAACTAAAAACAGATGGAGGCCAAATACTTGGCCATGATTTGAGTTCTGGCAGTTCTTCATTACTTAGAGGAATCCCAGTACATGGTGGGATGAGTAGTCTTTTGAGGACAAATCTGATTACCAGTTCAAAATCTCCCAAAGTAATCATAGCTGATTTATCTGGGGCACAACAAGTTGGGATTGGACTTCAAAATGATGATTCAACTAAAGCACGAGGTTATTCTCTGGCAAATTTGAATGGCCAATCATGTGCCTTTCCCGTGATGCCTCTAGAAGGTTCTGATCAGAAGATTCTCCCTGTAGATTTAAAGTTTGCTTCAACAGATCAAAAGATAGACTATGATTTGCTTCAAGCCCCTTACATCCCCTCTTCACATGTTGAGGATCATGTGCCTATTTGTGGTCAAACCCCTGCTGGTTTTGTCCACGATTGCCTTCATAAAGATGGTACCGGTCAATCTATGATGACAATGAATCCTAAACATGAACAAGATTGTGCTCAACCTCCATCAGGTGATGACCTGTTCGATGTTTTAGGTGTGGATCTTAAAAACAAATTACTGAATGGAAACTGGAATAAACTGCTTGCTGATGAATCTGAAGCTAATACAGAAACTGTGGATAAAAAGGAAACATATATGAACATGCAGGGTGCAAATCCTGATTGTTATTCAGTTAATGAAGCAATATCAGAAAGTGGCATCTTTTCTGGGATGGGAACAGATCACCTCTTAGATGCTGTGGTCTCAAAGGCCAAACCTATTGTCAAACAGAATTCTGATGAAATGTCTTGCAGGACATCAGTGACAGCGAACAGTTCCTCTTCTGTTCCCTCGCCGGCCTCTAGGCTTGTTATGTCTGGTCATTTACAAGGGAATTTGTTTGATTTTTCTAAGAATAGTGGTAAAACAGGTGCTGTAGAAACTAGTTCTCTAAGGTCTGGATGTAGCAAGGATGATGGTGGAAACTGTTCTCAAACTACTTCTATATATGGGTCTCAACTTAGATCATGGGTTGAAAATGGTGGCAATGTGAAGCGTGAAAGTAGTGTTTCAACTGGATACTCAAAGCGGCCGGATGAAGCTTGCAAACCAAATCGTAAAAGGCTTAAACCAGGAGAGAATCCCAGGCCTCGACCTAAAGATCGCCAAATGATTCAAGATCGTGTGAAAGAGTTGCGAGAAATTGTGCCAAATGGAGCAAAATGTAGCATAGATGCACTGCTGGAACGGACCATTAAGCATATGCTTTTCTTGCAAAGTGTGACAAAGCATGCTGACAAGCTGAAACAGACAGGGGAGTCTAAGATTATTAATAAGGAAGGTGGGCTGCTTTTGAAAGACAACTTTGAGGGAGGGGCTACATGGGCATATGAGGTTGGCTCCCAATCAATGGTTTGCCCTATTATAGTTGAGGATCTGAATCCTCCTCGTCAGATGCTAGTGGAGATGCTTTGCGAGGAACGAGGTTTCTTTCTGGAAATAGCTGACTTAATCAGAGGATTAGGATTAACCATCTTGAAGGGGGTAATGGAAGCCCGCAATGACAAAATCTGGGCGCGCTTTGCTGTTGAGGCAAACAGGGATGTAACAAGGATGGAAATATTTATGTCACTTGTCCGTCTATTGGAACAAACGGTGAAGGGCAATGCATCTTCATCCAATGCAATTGATAACATGATGGTTTATCACTGTCTCCCACAGGCTACCCAGATACCAGCAACTGGAAGGCCTAGTAGTTTGCAATGA 2871 0.4173 MGFLLKEVLKTLCGRNQWSYAVFWKIGCHNSKLLIWEECYYEPLPCFFPPSNFGTSNLPYQNGEGSWFASESQLPQLGIQEDRIFSLINKMNVNNSVIVAGEGIIGRAAFTGSHQWLLLNNFTKDVYPPEVYAEVHRQYSAGMQTVAVIPVLPHGVVQLGSLLPIMENMGFVNDVKGLILQLGCVPGALLSENYSAKLSNERLAGPTAAGVPVSVDPPVITSIHTPSVVNGSNQQSNSSHISRPVVQTPCLLRGEINTCQGSELAPQIHNLNQISNNLCQAKLTPMSKTNFAGQRDNRVVEAEVIPSNLSSYLQQHSVSFNARSAAFNNLLSSGPFGQSGLNSQKYMEQQILSAIGSQDHVNPCINASRTLNMSQLKTDGGQILGHDLSSGSSSLLRGIPVHGGMSSLLRTNLITSSKSPKVIIADLSGAQQVGIGLQNDDSTKARGYSLANLNGQSCAFPVMPLEGSDQKILPVDLKFASTDQKIDYDLLQAPYIPSSHVEDHVPICGQTPAGFVHDCLHKDGTGQSMMTMNPKHEQDCAQPPSGDDLFDVLGVDLKNKLLNGNWNKLLADESEANTETVDKKETYMNMQGANPDCYSVNEAISESGIFSGMGTDHLLDAVVSKAKPIVKQNSDEMSCRTSVTANSSSSVPSPASRLVMSGHLQGNLFDFSKNSGKTGAVETSSLRSGCSKDDGGNCSQTTSIYGSQLRSWVENGGNVKRESSVSTGYSKRPDEACKPNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIINKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVRLLEQTVKGNASSSNAIDNMMVYHCLPQATQIPATGRPSSLQ* 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00486 956 MobiDBLite consensus disorder prediction 717 758 - -
Rops7g00486 956 MobiDBLite consensus disorder prediction 734 758 - -
Rops7g00486 956 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 744 793 IPR011598 GO:0046983
Rops7g00486 956 CDD bHLH_AtLHW_like 748 817 - -
Rops7g00486 956 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 177 IPR025610 -
Rops7g00486 956 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 950 IPR043561 GO:0003700|GO:0006355
Rops7g00486 956 MobiDBLite consensus disorder prediction 676 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00486 Rops-Chr7 6155488 6162077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00486 547 941 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 54.000 3.14e-120 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00486 - - gmx:100787748 1388.63