Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00470 ATGACTATGGGTGTCTCAGGGAAGTGGATTAGATCATTGGTTGGTCTAAAGAAATCAGAAAAGCCAAAGTTTTCTGAGAAGGATGGAAATAAGATCGGCAACTTTCGCCATCAGAGAAAGCATTCCATCGAATTCGGTAATGGTAAACTTCCAAACGAATTTGATAACGATGCTACTCTACCTATTGGAGACGACAATGACCATACAAACCTTGAGGCCCATCATTCTTCTACTTCACAACAAGCACATGATGCTGCACACAACAATCAAATTATGAGGGAGGAATGGGCTGCAATACGCATTCAAACAGCATTTCGAGGATTTCTGGCCAGAAGAGCACTACGAGCTTTGAAAGGGTTGGTAAGGCTTCAGGCTCTTGTAAGAGGCCATGCAGTGAGAAAACAAGCTGCAATAACACTCCATTGTATGCAAGCTTTGGTAAGGGTTCAGGCTCGTGTTCGGGCAAGACGTGTTCGCATGACATTGGAAAGTCAAGCAGAACAACAGAAACTTCAGCAACAGATTGTAAATGATGCTCGTGTTCGAGAAATAGAACATGGATGGTGTGACAGTATGGGATCTATTGAAGAAATTCAGGCTAAAATATCGAAGAGACAGGAGGCTGCAGCAAAACGTGAGAGGGCCATGGCATATGCCCTATCTCATCAGTGGCAGGCAGGACAAAGACAGCAGGCTGTTTCATCTGGATTTGAACCAGATAAAACTAGCTGGGGTTGGAATTGGTTGGAAAGATGGATGGCCGTCCGTCCTTGGGAGAATCGCTTTGTTGACATTAATCTGAAGGATGGAGTAACGATACATGAAAATGGAACCACGGATGACAAAAATGGAACCAGACCTCCGTTAAGATCTGCTAACAAGAAACCATCTTCATCAAATACTCATCCAAACCCTGCAAGTGAGAGAACTGGTCCCACTCTTTCCGATGGCTGTGATTCTTCACCCTGTAAGTCAGCAGGTTTGCTGGAATCATCAAACACACAGCCTGCTAAGCCAGATTCTAAGGCAAATGTTGAAAATCACGTTGAAGAAGCTAAAGCAAAACCTGGAATTGGATCAAGATCTCACAGTAACCCAAAGGAGAGAGCATCGCAGGCAGATAAGCAGGCCAAAAAACGATTATCACTGCCTAACAATGCAGGGGGTGGTCCTGGGTCTCAAACAGCCAAACAACCTATTAGAACTAATGTGAAAGGGACACCAAGCATTCAAAAGCCTAGTAGGGATAAACCTAAGTTCAATAGGAGAGGGGATGTGAACCTCACAACATAA 1293 0.4416 MTMGVSGKWIRSLVGLKKSEKPKFSEKDGNKIGNFRHQRKHSIEFGNGKLPNEFDNDATLPIGDDNDHTNLEAHHSSTSQQAHDAAHNNQIMREEWAAIRIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLHCMQALVRVQARVRARRVRMTLESQAEQQKLQQQIVNDARVREIEHGWCDSMGSIEEIQAKISKRQEAAAKRERAMAYALSHQWQAGQRQQAVSSGFEPDKTSWGWNWLERWMAVRPWENRFVDINLKDGVTIHENGTTDDKNGTRPPLRSANKKPSSSNTHPNPASERTGPTLSDGCDSSPCKSAGLLESSNTQPAKPDSKANVENHVEEAKAKPGIGSRSHSNPKERASQADKQAKKRLSLPNNAGGGPGSQTAKQPIRTNVKGTPSIQKPSRDKPKFNRRGDVNLTT* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00470 430 ProSiteProfiles IQ motif profile. 143 170 IPR000048 GO:0005515
Rops7g00470 430 MobiDBLite consensus disorder prediction 343 357 - -
Rops7g00470 430 Pfam IQ calmodulin-binding motif 96 115 IPR000048 GO:0005515
Rops7g00470 430 SMART iq_5 116 137 IPR000048 GO:0005515
Rops7g00470 430 SMART iq_5 93 115 IPR000048 GO:0005515
Rops7g00470 430 MobiDBLite consensus disorder prediction 45 86 - -
Rops7g00470 430 Gene3D - 95 136 - -
Rops7g00470 430 ProSiteProfiles IQ motif profile. 118 145 IPR000048 GO:0005515
Rops7g00470 430 PANTHER IQ-DOMAIN 5-RELATED 3 392 - -
Rops7g00470 430 FunFam IQ-domain 11 93 144 - -
Rops7g00470 430 MobiDBLite consensus disorder prediction 282 341 - -
Rops7g00470 430 MobiDBLite consensus disorder prediction 387 410 - -
Rops7g00470 430 ProSiteProfiles IQ motif profile. 94 122 IPR000048 GO:0005515
Rops7g00470 430 MobiDBLite consensus disorder prediction 273 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00470 Rops-Chr7 5863652 5870658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00470 3 423 IQD Protein Family AT3G22190 51.981 3.48e-119 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00470 - - gmx:100787148 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00470 7 5863652 5870658 Rops7g00470 7 5863652 5870658 ECH