Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00453 ATGGGCACCGTCTTCCTTGTCCAACACGACTCCTCCTCCGGACATATGGCACTCAAGGTCGTTGAGAAATCCTCCGTCCACGACGCCGAACGCCGTGCCCGTTGGGAAATCCAAGTCCTATCCCGTTTGTCAAATCCTTTTCTCCCTTCCCTTCTTGGCACCTTCGAATCGGGTCAGTTATTGGGCTGGGCCCTGCCTTACTGCCCCGGCGGTGACCTCAACGTCCTCCGTCACCGTCAAATCGATCGTGTCTTCTCCCCGGCCGTTATCCGCTTCTACCTGGCTGAGATCATCTGCGCTCTAGAACACCTACATACCATGGGCATCGCTTACCGCGACCTGAAACCCGAGAACGTCCTCATTCAGCAAAACGGCCACGTCATCCTCACCGACTTCGATCTCTCACGCAAACTCTCACCCAAAAAGACCATCATTTCCCTCGACGATTCCAAGGTTCCCGACACACGCCGTAAATATCGCCGATGGATGTTCCAACTTGCACCCGACAACACTAACAGAAAAGGTGCCAAGTCAGCACGAGTCAGTCCACGCAAACCGAGTTTCTCCAACGGCGAACGATCCAACTCGTTTGTCGGAACGGAGGAATACGTCGCGCCGGAGGTTGTAACCGGCGTCGGTCATGAGTTCGCCGTTGATTGGTGGGCCCTTGGGGTACTTACTTACGAGATGCTGTACGGTACGACGCCGTTTAAGGGGAAGAATAGGAAGGAGACATTTCGAAACGTGTTGGTGAAGGCGCCGGAGTTTATTGGGAAGAAAACGGCATTAACGGACCTCATAGCGCGGTTACTTGAAAAGGACCCCACAAGACGATTGGGTTACGTTCGAGGTGCAAGTGAGATCAAGGAGCATGAGTTTTTCAGAGGGGTTAAGTGGGACCTACTAACGGAGGTTGTACGGCCGCCGTTTATTCCGTCAAGAGACGACGTTGCCTTGACGGCGGATCAATTTGCTGCTGGAGTGGACATAAGGGATTACTTCAAGAACTTGAAACCCCCGCCGTCGTTGCCCCCTTCTCCGTTACGGTCACCGTCTTCTGAGTTTCAAAAGAGTGTTTCTTTGACAGAATTCTGA 1095 0.5324 MGTVFLVQHDSSSGHMALKVVEKSSVHDAERRARWEIQVLSRLSNPFLPSLLGTFESGQLLGWALPYCPGGDLNVLRHRQIDRVFSPAVIRFYLAEIICALEHLHTMGIAYRDLKPENVLIQQNGHVILTDFDLSRKLSPKKTIISLDDSKVPDTRRKYRRWMFQLAPDNTNRKGAKSARVSPRKPSFSNGERSNSFVGTEEYVAPEVVTGVGHEFAVDWWALGVLTYEMLYGTTPFKGKNRKETFRNVLVKAPEFIGKKTALTDLIARLLEKDPTRRLGYVRGASEIKEHEFFRGVKWDLLTEVVRPPFIPSRDDVALTADQFAAGVDIRDYFKNLKPPPSLPPSPLRSPSSEFQKSVSLTEF* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00453 364 MobiDBLite consensus disorder prediction 349 364 - -
Rops7g00453 364 FunFam Serine/threonine-protein kinase OXI1 192 313 - -
Rops7g00453 364 Gene3D Transferase(Phosphotransferase) domain 1 191 313 - -
Rops7g00453 364 ProSiteProfiles AGC-kinase C-terminal domain profile. 295 364 IPR000961 GO:0004674|GO:0005524|GO:0006468
Rops7g00453 364 FunFam Serine/threonine-protein kinase OXI1 72 140 - -
Rops7g00453 364 MobiDBLite consensus disorder prediction 338 364 - -
Rops7g00453 364 Pfam Protein kinase domain 189 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00453 364 Pfam Protein kinase domain 2 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00453 364 ProSiteProfiles Protein kinase domain profile. 1 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00453 364 SUPERFAMILY Protein kinase-like (PK-like) 1 352 IPR011009 -
Rops7g00453 364 Gene3D Transferase(Phosphotransferase) domain 1 72 143 - -
Rops7g00453 364 SMART serkin_6 1 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00453 364 MobiDBLite consensus disorder prediction 171 194 - -
Rops7g00453 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 109 121 IPR008271 GO:0004672|GO:0006468
Rops7g00453 364 Gene3D Phosphorylase Kinase; domain 1 1 71 - -
Rops7g00453 364 PANTHER FLIPPASE KINASE 1-RELATED 1 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00453 Rops-Chr7 5647867 5649398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00453 2 364 AGC Kinase Gene Family AT3G20830 62.205 2.61e-150 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Rops7g00453 Pkinase 8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00453 - - gmx:100785281 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00453 7 5647867 5649398 Rops7g00453 7 5647867 5649398 ECH
Rops7g00453 7 5647867 5649398 Rops3g00712 3 8665854 8667338 PCT