Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00451 ATGGATTCTTCTGCTGTCATGGCTAGCACAATCTTGGAGCCTCGTAATGATATGGAATTTGAATCTCTTGAAGCTGCCTATGCATTTTACAAAGAATATGCTAAGTCTGCAGGGTTCGGTACTGCTAAGCAGAGCAGTCGCCGATCTAGGGCATCAAAGGAATTTATTGATGCCAAATTTTCATGTATAAGATCTGGTAATAAGCAGCAATCTGATGATGCAATTAATCCACGCCCTTCTCCAAAAATTGGTTGTAAAGCAAGCATGCATGTGAAGAGAAGAAAGGATGGTAAGTGGTATGTCTATGGCTTTGTGAAGGAGCATAATCATGAGCTTTTACCTGCTCAAGCTCATTTTTTCCGGAGTCACAGGGGTTCTGATCCACTAAGTAATGATGTTCGGATGCGAAGGCGGAAGAACTCGACTACTGTTTGTAAATTATTTAGTGCATATCAAAATGTTGATTGTTTAGAGAACTTTATGAAACATCAACATGATAGAGGACGAAATCTGGTTTTAGAAGCAGGGCATGCCCAATTGCTTCTGGAACTCTTCATGCACATGCAGGAAGAGAATCCAAAATTCTTCTATGCAGTTGACTTGAATGAAGAGCATCGACTGAGAAATGTGTTCTGGGTTGATGCTAAGGGGTTGGAAGATTTTGCTTACTTTGCCGATGTTGTTTCTTTGGACACAACATATTTTACAAACAAGTATAAAATACCATTGGTACTTTTCATTGGAGTTAACCATCATATTCAACCAACATTGCTTGGTTGTGCATTGATCGCCGATGAGACAGTATATACTTTTGCCTGGTTACTGCAAACATGGTTAATAGCGATGGGGGAACGAGCTCCACAAGTGATTCTCAGTGACCAAAATGAGGCTATTAAAGCAGCTGTTGCAGCTGTTCTTCCTGGAACACGTCATTGTTTTTGTTTGTGGCATGTTTTGGAAAAGATACCAAAACAACTTGAATTTTTAAGTGCTTGGCATGATAGCTTTATGGAAAAGTTTAACAAATGTATATATAAATCATGGACGGAGGAGCAATTTGAAAAGAGATGGTGGAAGTTGGTTGACAGGTTTAACCTTAAAGATGTTGAATGGGTCCGATCCTTGTATGATGATCGTACATGTTGGGTGCCAACTTTTATGAGAGATATTTCTTTTGCTGGCTTGTCTACTAGTGCACGCTCAGAAAGTTTAAATTCTTTGTTTGACAACTATGTCCATGTTGATACTTCATTGAAAGAATTTATAGAACAGTACCGAGTGATTCTTGAAGATAGGCATGAAGAGGAAGCCAAAGCAAATTTTGATGCTTGGCATGAAACACCTGAATTCAAGTCTCCTTCCCCTTTCGAAAAACAAATGTTATTAGTTTACACACATGAAATTTTTAAAAAGTTTCAGGGTGAGGTTTTGGGTGCAGCTGCTTGCCATCTTAAGAAAGAAAATGATGGTGTGACTACTACTTATGCTGTGAAAGACTTTGAAAACAATCAAAACTACATGGTAGAATGGAACACATCAAACTCAGATATATGTTGTTCATGTCATTTGTTTGAATATAAAGGCTACCTATGCAGACATGCCATTGTCGTTCTACAAATGTCTGGGGTTTTCAGCATCCCGCCAAAGCATATATTGCAAAGATGGACAAATGCTGCTATGAGCAGGCATCCTATTGGTGAAAAATTGGAAGAGGTTCAATCCAAGGTCCGGCGATTCAATGATTTATGTAGACGAGCCATTATATTGGGTGAAGAAGGTTCTTTGTCACAAGAAAGTTACTATATTGCTTTAGGCGCCATAAGTGAAGCTCTTAAGCAATGTGCAAATTTGAACAACTCTGTTGAGAATGGTATGAGACCTGATGTCTCTGCTACCCATGTTGTTTGTAATGTAGAAGAAGAATATCAACCTATTATCACATCTAACAATAAGGTCCCTGATCCAAAAATGAACACGGGTAAGAAGGCTGTGAGGACTGGTGTGGCTGGTTGGAGTCTAGGACGTGTTGAAAATAGTGAAGGAAATAAAGGCAAGGTACCTCAGCTTGAAGCAGGGAGTGGGAAAGATGGTTTTCAACAAATGGAGCCAATTGATCTGAGGTCACATAATGTCATGCCAATGCAGTTTCACAGCATGGTGCCGGCTCTGTTCCATAATGTTTCGTCGCCATTTAATACTGCAGCCTCAACTCATTTACATGAGAATCGTCTTCCTCGTTAG 2241 0.3954 MDSSAVMASTILEPRNDMEFESLEAAYAFYKEYAKSAGFGTAKQSSRRSRASKEFIDAKFSCIRSGNKQQSDDAINPRPSPKIGCKASMHVKRRKDGKWYVYGFVKEHNHELLPAQAHFFRSHRGSDPLSNDVRMRRRKNSTTVCKLFSAYQNVDCLENFMKHQHDRGRNLVLEAGHAQLLLELFMHMQEENPKFFYAVDLNEEHRLRNVFWVDAKGLEDFAYFADVVSLDTTYFTNKYKIPLVLFIGVNHHIQPTLLGCALIADETVYTFAWLLQTWLIAMGERAPQVILSDQNEAIKAAVAAVLPGTRHCFCLWHVLEKIPKQLEFLSAWHDSFMEKFNKCIYKSWTEEQFEKRWWKLVDRFNLKDVEWVRSLYDDRTCWVPTFMRDISFAGLSTSARSESLNSLFDNYVHVDTSLKEFIEQYRVILEDRHEEEAKANFDAWHETPEFKSPSPFEKQMLLVYTHEIFKKFQGEVLGAAACHLKKENDGVTTTYAVKDFENNQNYMVEWNTSNSDICCSCHLFEYKGYLCRHAIVVLQMSGVFSIPPKHILQRWTNAAMSRHPIGEKLEEVQSKVRRFNDLCRRAIILGEEGSLSQESYYIALGAISEALKQCANLNNSVENGMRPDVSATHVVCNVEEEYQPIITSNNKVPDPKMNTGKKAVRTGVAGWSLGRVENSEGNKGKVPQLEAGSGKDGFQQMEPIDLRSHNVMPMQFHSMVPALFHNVSSPFNTAASTHLHENRLPR* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00451 746 Pfam SWIM zinc finger 512 540 IPR007527 GO:0008270
Rops7g00451 746 Pfam FAR1 DNA-binding domain 29 114 IPR004330 -
Rops7g00451 746 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 616 IPR031052 GO:0006355
Rops7g00451 746 MobiDBLite consensus disorder prediction 675 697 - -
Rops7g00451 746 ProSiteProfiles Zinc finger SWIM-type profile. 506 542 IPR007527 GO:0008270
Rops7g00451 746 Pfam MULE transposase domain 227 320 IPR018289 -
Rops7g00451 746 SMART 26again6 517 544 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00451 Rops-Chr7 5611688 5615849 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops7g00451 MULE 6.3e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00451 - - gmx:100805273 1378.62