Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00445 ATGGAGAGAAAAACAAGAGGGAGAGGCAAAGCGAAGGAGGAGACAGGACTAGGCAACCGTCAAATTCTCGGAGATATTGGAAATCTGGAGCTATTTAGACCCGCGGAAGGGAAGCAGATTTCACCGCCCATCACAAGGAACACAATACTGTTGGCAAATGGACAAGATGCAGCAGACCCACTACATGCTAATGAGCAAGGAGCTGCACAAGGGAAGAAAAATGTTATTGTACCTGCACTAGGCAATAATGCAATTGTTTCCAAGAAACATGGTGTTGAAGATATGACTCACAAGCCAAATCCTGAGCCTGTAGATGTGGTTAGTTCTGAAGCTGGAGAAAAAGTTGATATTGTTTGTCAAAGAAAGTGTAGGAAGGTCCAGACCCTGACCTCAATACTTACTGCACCAAGCAAGGCTGCTTCCAGAATCTTGGCTGAGCCTGAGGATCAACCTGTTGATATTGATCCAAATAATGATGCTAATGATGATCCAGCAGTAGTTGAATACCTTGAAGATTTATACAAATTCTACAAGCTAGCAGAAGGTGAGAGCCAAGTTTCAGATTACATGAAATCACAGCATGAAATTAATGAGAGGATGAGGTCCATTACTGTGGACTGGCTGGTTGAAGTGCATAGGAGATTTCAACTAATGCCTGAGACGCTCTATCTTGCCATAAATATACTTGATCGATACCTCTCGTTGACAGATGTACCAAAAATAGAATTACAATTAGTGGGCATAAGCTCAATGCTCATAGCTTGCAAATACGAAGAAGTATGGCCTCCTCAGGTTAATGATTTTATTTGCATATCAGATAAAGCCTACACCAAATATCATATCCTTTCTATGGAGAAAGCAATTCTTGAAAAGTTACAATGGTACTTAACAGTTCCCACACCCTATGTCTTTTTACTTCAACTCATCCGAACATCTGTTCTGCCCGATCAGGAGATAGAGAACATGGCCTTTTTCCTTGCCGAACTTGGTCTTGTGCACTATCAAGCCATTGTTTTGCACTCCCCTTCAATGATAGCTGCTGCAGCAATCTTTGCTGCTCGTCGTATTCTCAACAAGCATCCCTTCTGGACTGAAATTCTACAACAACATGCTGGCTACGACACAGGACAGATAATGGATTGTGCCAAGCTGTTAGTCAGCTTACACGCAAGTGCCGCAGATAGGAAACTCCCTGCAGTGTACGTGAAATTCGCAAGTCCAGAAAGAGGAGCCGTTGCTCTTTTACCTCTACCAAAAGATCTAATAGAAAATTTCTAG 1278 0.4241 MERKTRGRGKAKEETGLGNRQILGDIGNLELFRPAEGKQISPPITRNTILLANGQDAADPLHANEQGAAQGKKNVIVPALGNNAIVSKKHGVEDMTHKPNPEPVDVVSSEAGEKVDIVCQRKCRKVQTLTSILTAPSKAASRILAEPEDQPVDIDPNNDANDDPAVVEYLEDLYKFYKLAEGESQVSDYMKSQHEINERMRSITVDWLVEVHRRFQLMPETLYLAINILDRYLSLTDVPKIELQLVGISSMLIACKYEEVWPPQVNDFICISDKAYTKYHILSMEKAILEKLQWYLTVPTPYVFLLQLIRTSVLPDQEIENMAFFLAELGLVHYQAIVLHSPSMIAAAAIFAARRILNKHPFWTEILQQHAGYDTGQIMDCAKLLVSLHASAADRKLPAVYVKFASPERGAVALLPLPKDLIENF* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00445 425 PANTHER CYCLINS 140 390 IPR039361 -
Rops7g00445 425 FunFam G2/mitotic-specific cyclin 185 297 - -
Rops7g00445 425 SUPERFAMILY Cyclin-like 162 296 IPR036915 -
Rops7g00445 425 SMART Cyclin_C_2 299 418 IPR004367 -
Rops7g00445 425 Pfam Cyclin, N-terminal domain 174 296 IPR006671 -
Rops7g00445 425 Gene3D - 172 413 - -
Rops7g00445 425 SMART cyclin_7 206 290 IPR013763 -
Rops7g00445 425 SMART cyclin_7 303 387 IPR013763 -
Rops7g00445 425 PIRSF Cyclin_A_B_D_E 1 424 IPR046965 GO:0016538|GO:0044772
Rops7g00445 425 Pfam Cyclin, C-terminal domain 299 416 IPR004367 -
Rops7g00445 425 SUPERFAMILY Cyclin-like 298 419 IPR036915 -
Rops7g00445 425 Gene3D - 186 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00445 Rops-Chr7 5544302 5548069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00445 2 421 Core Cell Cycle Gene Families AT2G26760 45.519 9.61e-120 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00445 K21777 - cave:132164002 435.261