Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00439 ATGCCAGTAAACACCAGAATTGGGATAGTTGGTGCTGGTCCAAGTGGCCTATCAGCTGCTTATGCATTGGCCAGGCTTGGTTATAATAACATCACCATCTTGGAGAAACACCATACAGTTGGTGGCATGTGTGAATCAGTAGAAATTGAAGGAAAAGTTTATGATCTGGGTGGGCAAGTTCTGGCTGCAAGCAGTGCTCCTGTCATCTTTCACTTAGCAAAAGAGACAGGGTCTCAACTAGAAGAAATGGATTCCCACAAGCTTGCTGTTATTGACAGTTCCTCAGGAAAATATCAAGATGTTAAAGTTGCTGATGACTATGTATCTGTTATGTCACTTACTTTGGGAATTCAAGAAAAGGTGAACAATTCTGGTCGTTTTGGGGTCCATGCTGTTAGTGAAGTTGCTTCAGACTTAACTCCAGAATATCTTGAGTGTCATGGACTCAAATCAGTTCCTAAATCTGTGGCTTATGGTTACACTGCTTCAGGATATGGATTTGTTCAAGACATGCCTTATGCCTACGTTCATGAATTTACCAGAACATCTATGGCTGGAAAAATTCGACGATTCAAAGGTGGATATACAAGTCTTTGGCAGAAGATTGCTGAATCACTTCCTGCTAAACTTCAATGTAACACTGAAGTGGTTGCAATCAGAAGGAACTCTGACACTGTCATTGTTGATGTCAAAAGCTCAAATGAAGTTGAAACTATGGAATTTGATAAGATCATAATCTCTGGTAACTTTCCATTAAAATATGGAAGAACCTACAGATCAGTGCCTTCAACTTGCATAGAGTGTGAAACTGAAGTAATGGATGCAAGTGACCTTGAAAAGGATTTGTTCAGCAAAGTAGAGACAAATGATTACTACACCACTGTTTTTAAGATCAAAGGGTTTGAACATATGCCAGTTGGATTTTATTATTTTAATGAATATATGGAAGATCCAAGCACAATTGGAAATCCAGTTGCCATGCAGAAGTTCTATGCTGATACTAATATATTCTTGTTCTGGTCCTATGGCAACTCTGCTGATATCAAGGGACCAACTGTCACTGAGCTCGCAATCAGCACAATAGAAGCCATGGGGGGAGAAGTTGAGAAATTCATTCTTCGACGTCGCTTTAAGTATTTTCCTCATGTTAGCAGCCAAGACATGAAAAACGGATTCTATGAGAAGTTGGAATCAGAGCTTCAAGGTTCAAGGAATACTTATTATGTCGGTGGGCTTATGGCATTTGAGCTCACAGAGAGAAATTCATCATATGCCATGGCTATGGTCTGCAAGAACTTTGCAAATAACAGTGATTTGCCAGTTTTTCCTTATACTAAGAGTTTGTTTCCCTTGCAAACTGAGTTCCAGAAAAAGGAGCCTAAAGAACTAGGTGAATTGCCTGGAGTGCAATTTCCCAATTTGCCTAATCTGAATAGCTATTTAAGGCACTGGGGAACTCATCCAGTCACTCGAAACAGAACTCTTTATTCTTGGTTAAATGAAGAAGGGACAGTGGCAGGCAAGAGGACATATAGAGAGCAACATTTAAATGCTTCTTGCGTTGCAAGTAAGCTCTTAACAAGCCAAAAGCCAATCATCAAGCCTGGTGACAAGGTTCTCCTGGTCTATGTTCCTGGTCTGGATTTCATTGATGCCTTCTTTGGATGCCTAAGAGCTAAAGTTATACCAGTCCCAGTTCTTCCCCCAGATCCCATGCAAAGAGGTGGACAAGCACTTCTGAAAATTGAGAACATTGCCAAGTCATGCAGCATAGTGGCAATTTTATCAACAGTAGGTTATCACTCAGCAGTCCGTGCAGGTTTAGTGAAAAGTTTAATTTCATTAACTGGGAAAAATGGTAAATCTTCAGCTAGATGGCCGAATCTTCCGTGGCTGCACACTGATACTTGGGTCAAAAACTCAAAAAGTTCTGCTAGGGAGGATCTAGATGATCAATGTGAACCTCAGCCTGGTGATATATGTTTCTTGCAATTTACCTCAGGTTCAACTGGGGATGCTAAAGGAGTCATTATCACACATGGAGGGCTTATTCACAATGTGAAGTTGATGAAAAGTAGATACAAGAGCACCTCAAGGACAATGCTTGTGAGCTGGCTTCCTCAATATCATGACATGGGGCTGATTGGAGGACTTTTCACAGCACTTGTTAGTGGTGGATCTGCAATTTTGTTTTCACCAATGACATTTATCAAGAAACCACTCTTGTGGCTTGAAACCATCAGCAAGTATCAAGCAACTCACAGTGCTGGCCCTAACTTTGCTTTTGAGTTGGTGGTTAGAAGGTTAGAGTCTGACAAGGATAAGCTTCAGAATTTTGACCTTTCATCCATGATTTTTCTTATGGTTGCTGCTGAACCAGTGAGACAGAAGACTCTGAAAAGGTTTCTTGAGTTAACTGGTCCTTTTGGCTTATCTCAAAAGGTGATGGCTCCTGGATATGGCTTAGCAGAAAATTGTGTGTTTGTCAGCTGTGCATTTGGAGAAGGCAATCCTATTCTTGTTGACTGGCAAGGAAGAGTTTGTTGTGGATATATTCACCCTGGGGATGCTGATATTGACATTAGAATAGTTGATCCAGATATTGGTGAAGAGCTTCATGAAGATGGAAAGGAAGGAGAAATCTGGATCAGTAGTCCAAGTGCAGGAATAGGATACTTGGGAAAGGAAGAATTGAGTCAGAAAACTTTTAGAAATGAGCTTCAGAACCTTCCTGGACGTAACTACACAAGAACTGGAGACTTGGGAAGGATAATAGATGGAAAGCTATTCATCACTGGAAGAATCAAGGACCTTATCATTGTTGCTGGAAGAAATATCTACTCCTCAGATGTTGAAAAGACAGTTGAGAGTTCATCTGAGTTTCTTCGTCCTGGATGCTGTGCTGTCATTGGTGTCCCTGAGGAAGTTTTGTCAGCAAAGGGAATTTCCTTGCCTGATGGATCTGACCAGGTTGGCTTGGTTGTGATTGCAGAAACAAGGGATGGTAAACCAGTTAGCAAAGATGTGGTTGAGCATATTCAGAGTCGTGTGGCAGAAGAACATGGAGTCAATGTTGCTTCTGTCAAGTTGATCAAGCCTAGAACCATCAACAAAACAACATCAGGAAAAATCAAGAGATTTGAATGTCTCAAACAGTTCTCAGATGGAACACTGAACTTGGTACCACAACCTCTTTTGACAAAGAAAACACTGGTAAGGTCATTTACTACAGGAACATGTAGAGAAGGAAGAACACCCCGGTCCCAGCTAGTGAGAAGTACACCTCCACCTAGTCCAAGAATCAGTAACAAGGAAATTGTGGAATTCTTGAAAAAGCTTATTTCTGAGCAGTCTGGAATCCCAATAAGCAACATCTCAGTCACAGACAACATGTCAACCTATGGAATTGATTCAATTGGTGTGGTTAAAGCAACTCAAAAACTCTCAGATTTCCTTGGAGTGCCAGTTGCTGCTATAGATGTTTTCTCAGCATCCTGCATTCAAGAATTGGCTAACTTCACGGAGAATCTTCTATTGAAGTCTCAACCTCAACTTATGAGCAATCCATCCCATGCTCCTGAAGCTGAGATGGATTCTACTGAATTGGTTGTGGATGTTTCCAAGTCTCACCAATGGGGTATCCATTTACTTCAATTCCTAGCACTTGTTTATATTTCTATCATGCTGGTCTCTCCAGCTTATCTATCCATCACTGCTTTTCTAAGTTTCATCCCAAATGACAGTAACTGGTCAAACTATCTGATGTCTCTGACTTTGGCACCCCTTTCTTGGATCCTTTGCATTGCTTCTACTTGCTTTTGCATTTCATTTTTTGGGAATTCTTTCTTGAAGCCAAACTATGCCCTTACTCCTGAAATCTCTATCTATTCAATGGATTTTGTCAAGTGGTGGGCACTTTACAAAAGCCAGGAAATTTCTTCGAAAGTTCTGGCAATACACCTCAAAGGAACAGTGTTTCTGAAATACTGGTTTGAGATGTTTGGTGCAAGAATTGGATCCTCAGTTTTGCTTGACACAGTTGACATCACTGACCCGTCTTTGGTTTCAATTGGTGATGAAGCTGTCATTGCTGAAGGGGTTTTGGTTCAAAGCCATGAGGTAAAGAATGGTCTTCTAAGTTTCCTTCCTATTAGGATTGGCCAAAATTCTTCCATTGGACCTTATGCTGTTATTCAAAAAGGAAGTGTTATTAGAGAAGGAGCTGAGGTACAGCCCCTGCAAAAGGTTGAAGAAGGCCAACAAGTGCTCAAACCTGCTAAGCTTAATAATGTTAAAGAGAATGCAGTGCTGCTTGTTACTACCAGCAAAACTCAGTCTGATGCTATGCACCATTTTCTGGGGATTTATCTTGTTGCCTTTCTCAGCTCCCTTGCTGCAGCTATTGCTTACTTCTTATATATAAGATTCTTCCAGAAACCTGCATCATTCCAACACTTCACCTTTGTTTGCGTATGTGGGGCCTTCCACTGGATCCCATTTACCATTATTGCATATGCTGCCATGTTTTCTGAGGTCCTATCAAATCCCATTGCCTTTACCATTTTATTTACCTGCGCATACTTGTTTCATGGTCTCATACTCACCTCTCTCACCTGTGCTTTGACTCGTTTTCTCAAAGTCAGTCAAAAGCAAACCCACTTTAATACCTGGCTTCAGCACCAATTGACCCTTTCCTGCCACTTAAAATTTGCAAAGCTTCTCTCAGGAACAGAAGCCTTCTGCATATATTTACGCCTTTTGGGAGCAAAAATTGGCAAGCATTGTTCCATTAGAGCCATCAACCCAGTTTCAAACCCAGAGTTAATGTCAATAGGTGATGGTGTCCATCTTGGTGATTTTAGCAGGATAATCACTGGTTTCCATTATTCCAATGGATATGCTTGTGGAAAAGTAGAGGTTCAAGATAACTCAGTTGTTGGAAGTCAAAGCCTAATTCTCCCTGGTTCTCTTGTGGAAAAGAATGTCATTCTAGGTGCACTTTCAGTTGCTCCAATGAATTCTATACTCCATGAGGGTAGCGTGTACATTGGATCTCAAACCCGAGTTGCTACTAGGAACTCAGGAAATGCTTTGGATGAAAGGATAGAGGAGATGGACATGGAATACAAGAAAGTAGTTGGAAATTTGGCTGCAAATTTAGCTGCCACAACCATGAATGCTAAAGCAAGATACTTCCATCGCATTGGTGTTGGTGGAAAAGGGTACTTGAAAATATATGACAAACTTGAGGGTGTTCTTCTGCACAAGATTTTTCACCCTGGAAAGAGCTACCCTGTAATGGTAAGGCACAGTAATAGCTTGAGTGCTGATGATGATGCAAGGATTGATGCACGTGGTGCAGCTTTAAGGATACTTTCTAATGAACCTGATTCTAATTCTCCTCTCATTGACTTAACACTTAAAACTGGCAAGGCATTTTATGCTCGCACTATAGCTGATTTTGCAAGCTGGTTAGTGTGTGGACTTGCTGCAAGAGAGGAACTTGTCAAGAGTGTTCCACATGTTCGTGAAGCAGTGTGGACTTCACTTCGTCATGCTGATTCATATGCTGAATTGCATTACTACTCAAACATTTGCAGGCTCTTGCGCTTCATAGATGGAAAGGAAATGTATGTGAAATTCAAGTTAAGGCCTTATGACACAAGTATCAGTGAGGAAACAGGTAAGGTTGTGCCAACTGGGATTCTTCCACCTGAGACAGGTGCAATTCCTAGGGATGAAAATGATAAACGTCCTTTACTTTTCCTTGCTGATGATTTTCAAAAGCGTGTGAGTTCCCCAGGTGGAGTTACCTATGTTTTTCAGGTGCAAATAAGACCAGTGCCAGATGATGAAGTCACTCGTGAAATTGCACTTGATTGCACCAAACCATGGGATGAAAATGAATTCCCTTACATTGATGTTGGAGAGATCAATATCAAAGAAAACCTTTCTATGGAAGAATCAGAAAAGCTTGAATTCAATCCCTATCTCCGAAGCCATGAGTTGGATGTTATTCCTGCTAATTCCAACACTCAAAGTGCTTCAATTGATCATGGCCGTTCATTGATTTATGAGATTTGTCAGCACGTGCGTAATAGACAGCCACTCCCAGAAGCTTGGAGGAACCTTGTACATCAATCTAACGTTAAGGTAGACCTGTCATGTTGTCCAGTGGCAGCAGCAACAGCAGCATCATTGCCAGAAAAAGAGCCTTTGCTGAAAAAAGTGACCTTGACAAGAACATGGTATCAAACCTTCTCAGCACTCTTCACTCAACCGTTACTACAAACGGCTTTACCTTACATGGTGGTTGGTTTAGCTGTTTTTGCTCCTTTGAACTTTATTGTTTACCTAAAGAATGTGAATAAGCTACCACTGCATTGGTTGCTTCCCATGTTTTGGGTTCTCTCTGGTATTATGACTGCATTGGCATGTGTCATAGCCAAATGGGTTCTCATTGGAAAGAAGAAAGCTGGTGAAACAGTACCAATATGGAGTATAAGGATAGTCATGGATAGCACATGGCAGGCTATTAGAACTTTGATTGGAGATTATTTTATGGACATGACAAGAGGGTCATTTTTGTTTGTGTTATGGATGAAGTTGATGGGTGCAGACATAGAAATGGATCGTGCTGCTTATGTGGATAGCATGGGAGCTTTGTTAAACCCTGAAATGGTGAAGATTGAGAGAGGGGGTTGTGTGGGAAGAGAAGCATTGCTCTTTGGACATATATATGAAGGTGAAGGAGGGATGGTGAAGTTTGGAGAGATTAAGATTGGTGAAGATGGGTTTGTGGGAAGTAGAGCCATGGTTATGCCTGGTGTGCAAGTGGAGAATGAGGCCAATCTTTGTGCCTTGTCTCTAGCCATGAAAGGAGAAATCATTAGATCAAGATAA 6903 0.4118 MPVNTRIGIVGAGPSGLSAAYALARLGYNNITILEKHHTVGGMCESVEIEGKVYDLGGQVLAASSAPVIFHLAKETGSQLEEMDSHKLAVIDSSSGKYQDVKVADDYVSVMSLTLGIQEKVNNSGRFGVHAVSEVASDLTPEYLECHGLKSVPKSVAYGYTASGYGFVQDMPYAYVHEFTRTSMAGKIRRFKGGYTSLWQKIAESLPAKLQCNTEVVAIRRNSDTVIVDVKSSNEVETMEFDKIIISGNFPLKYGRTYRSVPSTCIECETEVMDASDLEKDLFSKVETNDYYTTVFKIKGFEHMPVGFYYFNEYMEDPSTIGNPVAMQKFYADTNIFLFWSYGNSADIKGPTVTELAISTIEAMGGEVEKFILRRRFKYFPHVSSQDMKNGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMAMVCKNFANNSDLPVFPYTKSLFPLQTEFQKKEPKELGELPGVQFPNLPNLNSYLRHWGTHPVTRNRTLYSWLNEEGTVAGKRTYREQHLNASCVASKLLTSQKPIIKPGDKVLLVYVPGLDFIDAFFGCLRAKVIPVPVLPPDPMQRGGQALLKIENIAKSCSIVAILSTVGYHSAVRAGLVKSLISLTGKNGKSSARWPNLPWLHTDTWVKNSKSSAREDLDDQCEPQPGDICFLQFTSGSTGDAKGVIITHGGLIHNVKLMKSRYKSTSRTMLVSWLPQYHDMGLIGGLFTALVSGGSAILFSPMTFIKKPLLWLETISKYQATHSAGPNFAFELVVRRLESDKDKLQNFDLSSMIFLMVAAEPVRQKTLKRFLELTGPFGLSQKVMAPGYGLAENCVFVSCAFGEGNPILVDWQGRVCCGYIHPGDADIDIRIVDPDIGEELHEDGKEGEIWISSPSAGIGYLGKEELSQKTFRNELQNLPGRNYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSSDVEKTVESSSEFLRPGCCAVIGVPEEVLSAKGISLPDGSDQVGLVVIAETRDGKPVSKDVVEHIQSRVAEEHGVNVASVKLIKPRTINKTTSGKIKRFECLKQFSDGTLNLVPQPLLTKKTLVRSFTTGTCREGRTPRSQLVRSTPPPSPRISNKEIVEFLKKLISEQSGIPISNISVTDNMSTYGIDSIGVVKATQKLSDFLGVPVAAIDVFSASCIQELANFTENLLLKSQPQLMSNPSHAPEAEMDSTELVVDVSKSHQWGIHLLQFLALVYISIMLVSPAYLSITAFLSFIPNDSNWSNYLMSLTLAPLSWILCIASTCFCISFFGNSFLKPNYALTPEISIYSMDFVKWWALYKSQEISSKVLAIHLKGTVFLKYWFEMFGARIGSSVLLDTVDITDPSLVSIGDEAVIAEGVLVQSHEVKNGLLSFLPIRIGQNSSIGPYAVIQKGSVIREGAEVQPLQKVEEGQQVLKPAKLNNVKENAVLLVTTSKTQSDAMHHFLGIYLVAFLSSLAAAIAYFLYIRFFQKPASFQHFTFVCVCGAFHWIPFTIIAYAAMFSEVLSNPIAFTILFTCAYLFHGLILTSLTCALTRFLKVSQKQTHFNTWLQHQLTLSCHLKFAKLLSGTEAFCIYLRLLGAKIGKHCSIRAINPVSNPELMSIGDGVHLGDFSRIITGFHYSNGYACGKVEVQDNSVVGSQSLILPGSLVEKNVILGALSVAPMNSILHEGSVYIGSQTRVATRNSGNALDERIEEMDMEYKKVVGNLAANLAATTMNAKARYFHRIGVGGKGYLKIYDKLEGVLLHKIFHPGKSYPVMVRHSNSLSADDDARIDARGAALRILSNEPDSNSPLIDLTLKTGKAFYARTIADFASWLVCGLAAREELVKSVPHVREAVWTSLRHADSYAELHYYSNICRLLRFIDGKEMYVKFKLRPYDTSISEETGKVVPTGILPPETGAIPRDENDKRPLLFLADDFQKRVSSPGGVTYVFQVQIRPVPDDEVTREIALDCTKPWDENEFPYIDVGEINIKENLSMEESEKLEFNPYLRSHELDVIPANSNTQSASIDHGRSLIYEICQHVRNRQPLPEAWRNLVHQSNVKVDLSCCPVAAATAASLPEKEPLLKKVTLTRTWYQTFSALFTQPLLQTALPYMVVGLAVFAPLNFIVYLKNVNKLPLHWLLPMFWVLSGIMTALACVIAKWVLIGKKKAGETVPIWSIRIVMDSTWQAIRTLIGDYFMDMTRGSFLFVLWMKLMGADIEMDRAAYVDSMGALLNPEMVKIERGGCVGREALLFGHIYEGEGGMVKFGEIKIGEDGFVGSRAMVMPGVQVENEANLCALSLAMKGEIIRSR* 2301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00439 2300 Gene3D - 1096 1177 IPR036736 -
Rops7g00439 2300 SUPERFAMILY Trimeric LpxA-like enzymes 2151 2293 IPR011004 -
Rops7g00439 2300 SUPERFAMILY ACP-like 1101 1192 IPR036736 -
Rops7g00439 2300 Gene3D Catalase core domain 1690 2041 - -
Rops7g00439 2300 ProSiteProfiles catalase family profile. 1661 2300 IPR018028 GO:0004096|GO:0006979|GO:0020037
Rops7g00439 2300 SUPERFAMILY Acetyl-CoA synthetase-like 477 1062 - -
Rops7g00439 2300 ProSiteProfiles Carrier protein (CP) domain profile. 1104 1178 IPR009081 -
Rops7g00439 2300 CDD FAAL 482 1055 IPR040097 GO:0008610
Rops7g00439 2300 SMART Phosphopantetheine attachment site 1107 1178 IPR020806 GO:0031177
Rops7g00439 2300 SUPERFAMILY Trimeric LpxA-like enzymes 1581 1701 IPR011004 -
Rops7g00439 2300 Gene3D Hexapeptide repeat proteins 1567 1689 - -
Rops7g00439 2300 SUPERFAMILY Trimeric LpxA-like enzymes 1322 1419 IPR011004 -
Rops7g00439 2300 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 117 2052 - -
Rops7g00439 2300 SUPERFAMILY Heme-dependent catalase-like 1663 2033 IPR020835 GO:0020037
Rops7g00439 2300 Pfam AMP-binding enzyme 507 941 IPR000873 -
Rops7g00439 2300 ProSitePatterns Putative AMP-binding domain signature. 663 674 IPR020845 -
Rops7g00439 2300 Pfam Phosphopantetheine attachment site 1109 1173 IPR009081 -
Rops7g00439 2300 Gene3D - 465 935 IPR042099 -
Rops7g00439 2300 Gene3D - 286 379 - -
Rops7g00439 2300 Gene3D - 6 429 IPR036188 -
Rops7g00439 2300 SUPERFAMILY FAD/NAD(P)-binding domain 1 254 IPR036188 -
Rops7g00439 2300 Gene3D Hexapeptide repeat proteins 1333 1449 - -
Rops7g00439 2300 PRINTS Adrenodoxin reductase family signature 6 28 - -
Rops7g00439 2300 PRINTS Adrenodoxin reductase family signature 30 43 - -
Rops7g00439 2300 Gene3D - 77 185 - -
Rops7g00439 2300 ProSitePatterns Phosphopantetheine attachment site. 1133 1148 IPR006162 -
Rops7g00439 2300 Gene3D - 936 1063 IPR045851 -
Rops7g00439 2300 Pfam Flavin containing amine oxidoreductase 15 248 IPR002937 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00439 Rops-Chr7 5493815 5494321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00439 659 974 Monolignol Biosynthesis Gene Families AT1G20480 27.129 4.54e-21 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00439 - - pcin:129313184 3677.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00439 7 5493815 5494321 Rops7g00439 7 5493815 5494321 ECH
Rops7g00439 7 5493815 5494321 Rops3g00694 3 8450056 8450730 PCT