Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00421 ATGATGGATCACCAATCTGGCCAAGGATTTGATTCAGATGGTAGTGACCTTGATATGCAAGCAGAAATTAGTGAGAAACATGAGAAATTAGAAGATGTGTTTTCAAAAGATTTAGAATTATGTGCAGTTGAAGATGAAAAGTTTGTCGAACAATCTGTAGCAAATACAGAAGCTTTAGAACCATTCATTGGCATGCAGTTCAACTCAAGGGAGGAAGCCAGAGAATTCTACATTGCCTATGGTAGGCGGATAGGATTTACCGTACGAATACACCATAACCGTCGTTCACGAGTGAATAACCAGGTTATTGGTCAAGATTTTGTCTGCTCAAAAGAAGGCTTTCGTGCAAAAAAGTATGTACACAGAAAAGATAGAGTGCTCCCTCCTCCACCAGCCACCCGAGAAGGTTGTCAGGCCATGATAAGGTTGGCTTTACGGGATGGAGGGAAGTGGATTGTAACCAAATTTGTGAAGGAGCACACCCATAAGCTGTTGAGTCCCAGTAAAGTTCCATGGCGAGGATCTGGGAAGCACTTGGTTAGTGAGGATGAGAAAGATAAGAGAATCCGTGAGCTATCACTTGAGTTGTACAATGAAAGACAAAAGTGCAAACGACGTTGTGCTGCATATGAAGAACAGTTAAATATGATTCTCAACGATTTGGAAAAGCATACAGAACACATCTCTGAAAAGGTTGCTGATATAGTCCGAAGTATAAGAGAGATTGAGGAAGAAAAATCAGATTCAGATGGTGGGTAA 759 0.4111 MMDHQSGQGFDSDGSDLDMQAEISEKHEKLEDVFSKDLELCAVEDEKFVEQSVANTEALEPFIGMQFNSREEAREFYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVHRKDRVLPPPPATREGCQAMIRLALRDGGKWIVTKFVKEHTHKLLSPSKVPWRGSGKHLVSEDEKDKRIRELSLELYNERQKCKRRCAAYEEQLNMILNDLEKHTEHISEKVADIVRSIREIEEEKSDSDGG* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00421 252 Coils Coil 200 227 - -
Rops7g00421 252 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 245 - -
Rops7g00421 252 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00421 Rops-Chr7 5262047 5266044 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops7g00421 FAR1 4.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00421 - - gmx:100813124 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00421 7 5262047 5266044 Rops7g00421 7 5262047 5266044 ECH