Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00418 ATGGGGTTCTCAGTAAGACAATTCTTAATCTACGCTTTGAATATGAACCCATGTGCTGTTGCAGTTGGGATCCTATTTGAGGTGGTGGTTTTTTCATACTTGTGGTTGCCAGTTTCGAGTCTTGGTTCCATGTCTTCAATTGCAGTCTCTTATGGAGATAAAGGTTCCGTTTTTTGTGGTCTGAAACCAGATGGATCTCATACTGTGACATGTTATGGATTGAACTCAGCCATAATTTATGGAACACCATCCCATTTCCCATTCTTTGGTCTAACCGCTGGAGATGGCTTTGTCTGTGGGCTTTTAATGAGTTCTAGTCAACCATATTGTTGGGGTAGCAGTAGCCATATAGAAATGGGTGTGCCACAGCCTATGGTTAAGGGAGCTCAGTACCTAGAAATCAGTGCTGGGGATTATCATGTTTGTGGATTGAGGAAACCCTTGACAGGAAGACACAGGAACTTTTCCTTTGTTGATTGTTGGGGCTACAACATGACCAAGAACTATGTGTTTGATGGGCAGATTCAATCAATCTCAGCTGGTTCTGAATTCAATTGTGGCTTATTTTCCCAGAATAGGACTGTGTTTTGCTGGGGTGATGAGACTAGTAGCCAGGTTATTAATTTGATTCCTCAAGGCATGAGATTCCAGAAGCTCTCTGCTGGTGGGTATCATGTATGTGGAATCTTAGAAGGGGTGAATTCTAGAGCTGTTTGTTGGGGAAGGAGCTTGGATATGGAGGAAGAAATTTCATTGAAACATTCAGCACAAGGACAAGGTGGTAATGTTGATTTGGCTCCACATGATCCCATGCTTTCTGTTGTGGGAGGAAAGTTCCATGCTTGTGGCATTAAGAGCTATGATCATGGAGTGATTTGTTGGGGCTATAGTTTGAAAGCAAGCACCCCAGTTCCTAGTGGGATTAAGGTCTTTGAGATTACAGCTGGGAATTATTTTACATGTGGAATACTTGGTGAGAAATCTCTTGTGCCTGTTTGTTGGGGTGTTGGATTCCCTACCTCTCTTCCATTGGCTGTGTCACCAAGAATGTGTAGGCCTACTCCATGTCCTCCTGGTTACTATGAAATCGACAAGGACCAGCAAAAGGGTCTTTGCAAGTCCCCAAATTCTCACGTTTGCATGCCATGCAGCGGTGTTTGTCCTGCTGAGATGTATCAGACAAGTGGGTGCAATTCGAAATCTGACAGATTATGTGAATATAATTGTTCTGCTTGTTCCTCATCTGAATGCTTCTCCAATTGCTCCTCTTCCTACTCCAACGCTGTCACTGGGAAGAAAAATGAAAGATTTTGGTCCGTGCAGTTGCCAGTGGTTATTGCTGAGATAGCTTTTGCAGTTTTCTTAGTCAGTATAGTATCTATAACTGCAGTTTTGTATGTTCGCTATAAGCTAAGAGATTGTAAGTGTTCAGTAACTGGGCCAAAGGTGAAGAAACTTAATGGTGGTTCTTCACTCCAAAAGGAGAACAGCAAGATCCGGCCAGACATGGAGGAGTTCAAGATTAGGAGGGCTCAGATGTTCACCTATGAGGAACTTGAAAGGGCAAGTGGTGGATTCAAAGAAGAATCCATAGTGGGGAAAGGAAGTTTCTCATGTGTGTTCAAAGGGGTTCTCAAAGATGGTACTGTTGTTGCTGTTAAAAGGGCCATAATGTCTCCCAACATGCAGAAAAATTCCAAAGAGTTTCACACTGAGCTGGACTTACTCTCTAGGTTGAACCATGCCCATTTGCTCAATCTGCTAGGCTATTGTGAAGAAGGTGGAGAAAGGCTTCTTGTTTATGAGTACATGGCTCATGGTTCATTGCATCAACACCTCCATGGCAAAAACGAAGAGTTGAAAGAGCAGTTGGATTGGGTCAGAAGGGTAACAATTGCAGTCCAAGCAGCACGTGGAATTGAATATTTGCATGGCTATGCTTGCCCACCTGTGATTCATCGAGACATCAAGTCTTCAAACATCCTCATTGATGAAGAACACAATGCACGAGTGTCTGATTTTGGTTTATCATTACTTGGTCCTGCAGATAGTAGCTCCCCACTGGCTGAGCTACCAGCTGGAACTCTTGGTTATCTTGATCCTGAATACTATAGGCTTCATTATCTTACCACAAAATCTGATGTCTACAGCTTTGGTGTTCTACTCTTGGAAATTTTAAGTGGTAGAAAAGCCATTGACATGCAATATGAAGAAGGGAACATAGTTCAATGGGCAGTGCCTTTGATCAAGTCAGGAGATATAACTGCAATTTTGGACCCGGTTTTGAAACCTCCTTCAGATCTTGAAGCCTTGAAAAGGATTGCAAATGTGGCTTGTAAAAGTGTGAGAATGAGAGGGAAGGAGAGGCCTTCAATGGACCAAGTAACAACAGCTTTGGAGAGAGCTCTTGCACAGTTAATGGGTAGCCCTTGCATTGAGCAACCAATTTTGCCTACTGAGGTGGTTTTGGGAAGTAACAGATTACACAAGAAATCATCTCAAATGTCTTCAAACAGGTCAGCTTCAGAAACTGATGTGGCAGAAACTGAGGATCAAAGGTTTGAGTTTAGAGCACCCTCATGGATAACTTTCCCTAGTGTTACTTCTTCTCAAAGAAGAAAGTCATCAGGCTCAGAGGCTGAGGTTGATGGGAAAACTATAGAAGGGAGGAACTTTGGTAGCAATGTTGGAGGTGGTGGTGGTGATGTTTTGAGAAGTCTTGAAGAAGAGATTGGTCCGGCCTCTCCTCAAGAGAGACTCTTTTTGCAACACAACTTCTAA 2781 0.4301 MGFSVRQFLIYALNMNPCAVAVGILFEVVVFSYLWLPVSSLGSMSSIAVSYGDKGSVFCGLKPDGSHTVTCYGLNSAIIYGTPSHFPFFGLTAGDGFVCGLLMSSSQPYCWGSSSHIEMGVPQPMVKGAQYLEISAGDYHVCGLRKPLTGRHRNFSFVDCWGYNMTKNYVFDGQIQSISAGSEFNCGLFSQNRTVFCWGDETSSQVINLIPQGMRFQKLSAGGYHVCGILEGVNSRAVCWGRSLDMEEEISLKHSAQGQGGNVDLAPHDPMLSVVGGKFHACGIKSYDHGVICWGYSLKASTPVPSGIKVFEITAGNYFTCGILGEKSLVPVCWGVGFPTSLPLAVSPRMCRPTPCPPGYYEIDKDQQKGLCKSPNSHVCMPCSGVCPAEMYQTSGCNSKSDRLCEYNCSACSSSECFSNCSSSYSNAVTGKKNERFWSVQLPVVIAEIAFAVFLVSIVSITAVLYVRYKLRDCKCSVTGPKVKKLNGGSSLQKENSKIRPDMEEFKIRRAQMFTYEELERASGGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIMSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEYMAHGSLHQHLHGKNEELKEQLDWVRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVSDFGLSLLGPADSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVQWAVPLIKSGDITAILDPVLKPPSDLEALKRIANVACKSVRMRGKERPSMDQVTTALERALAQLMGSPCIEQPILPTEVVLGSNRLHKKSSQMSSNRSASETDVAETEDQRFEFRAPSWITFPSVTSSQRRKSSGSEAEVDGKTIEGRNFGSNVGGGGGDVLRSLEEEIGPASPQERLFLQHNF* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00418 926 Gene3D - 87 349 IPR009091 -
Rops7g00418 926 ProSiteProfiles Protein kinase domain profile. 526 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00418 926 Gene3D Phosphorylase Kinase; domain 1 496 603 - -
Rops7g00418 926 MobiDBLite consensus disorder prediction 828 851 - -
Rops7g00418 926 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 355 405 IPR001368 GO:0005515
Rops7g00418 926 FunFam serine/threonine-protein kinase-like protein CCR1 496 603 - -
Rops7g00418 926 Pfam Protein tyrosine and serine/threonine kinase 529 798 IPR001245 GO:0004672|GO:0006468
Rops7g00418 926 SUPERFAMILY RCC1/BLIP-II 40 296 IPR009091 -
Rops7g00418 926 SMART serkin_6 526 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00418 926 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Rops7g00418 926 MobiDBLite consensus disorder prediction 828 843 - -
Rops7g00418 926 FunFam Serine/threonine-protein kinase-like protein CR4 40 207 - -
Rops7g00418 926 MobiDBLite consensus disorder prediction 867 926 - -
Rops7g00418 926 ProSitePatterns Protein kinases ATP-binding region signature. 532 554 IPR017441 GO:0005524
Rops7g00418 926 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 26 926 - -
Rops7g00418 926 FunFam Receptor protein kinase CRINKLY4 604 806 - -
Rops7g00418 926 SUPERFAMILY Protein kinase-like (PK-like) 505 799 IPR011009 -
Rops7g00418 926 Gene3D Transferase(Phosphotransferase) domain 1 604 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00418 Rops-Chr7 5226780 5229560 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00418 24 926 Receptor kinase-like Gene Family AT3G59420 68.097 0.0 1265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Rops7g00418 PK_Tyr_Ser-Thr 3.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00418 - - gmx:100809215 1554.27