Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00417 ATGATAAGCAAAATTACGGAAGCTCTTCTTCCTACGACAATCGAACTTGCGTCAGCCTCAGTTCTCATGGAGTTTGGGATTGATGGCTCCATTAATGGTGAGACAGCCGAAAATGCTACTGTGAGAGAGGTTAGTAGCAGCATAGCTGACGAAAACAAAATGGGCTGCAGTTCTTTTGATCCAAATTGTAAACAAGATCAAGATGATAATATAACTCAAGATTCTTCTGGAGGGGACACAATCCCATCAGCAATTCCTGCAGTATCGGTTGTGTCAGCCAATGAACCCTATGTTGGTCAGGAGTTTGAATCAGAAGCCGCAGCACATGCATTTTATAATGCATATGCTACACAAGTTGGATTTTTCATACGTGTAAGTAAGCTCTCACGATCAAGGCGTGATGGGTCTGCTATTGGACGAGCTCTTGTTTGCAACAAAGAAGGTTACAGAATGTCTGACAAGCGTGAAAAGATTGTAAGGCAAAGGGCAGAGACAAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGGAAAATAAGTTCGGGTAAATGGGTTGTAACAAAGTTTGTAAAGGAGCACACACATCCTCTGACACCTGGAAAAGGTAGAAGGGATTGCATCTATGAGCAATATCCGAATGAACATGATAAAATTCGAGAACTATCTCAGCAGTTGGCTATAGAGAAAAAGCGATCTGCAACCTATAAAAGGCATCTTGAATTGTTATTTGAGCACATCGAGGAGCATAATGATACTCTTTCAAAGAAAATACAGCACATAGTAGACGGTGTGAAGGAGATGGAAACCCAAGAACAAGAGAGTAGTCATAGGTAG 831 0.4176 MISKITEALLPTTIELASASVLMEFGIDGSINGETAENATVREVSSSIADENKMGCSSFDPNCKQDQDDNITQDSSGGDTIPSAIPAVSVVSANEPYVGQEFESEAAAHAFYNAYATQVGFFIRVSKLSRSRRDGSAIGRALVCNKEGYRMSDKREKIVRQRAETRVGCRAMILVRKISSGKWVVTKFVKEHTHPLTPGKGRRDCIYEQYPNEHDKIRELSQQLAIEKKRSATYKRHLELLFEHIEEHNDTLSKKIQHIVDGVKEMETQEQESSHR* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00417 276 Pfam FAR1 DNA-binding domain 111 197 IPR004330 -
Rops7g00417 276 MobiDBLite consensus disorder prediction 56 79 - -
Rops7g00417 276 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 28 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00417 Rops-Chr7 5219106 5224448 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops7g00417 FAR1 2.2e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00417 - - gmx:100806900 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00417 7 5219106 5224448 Rops7g00417 7 5219106 5224448 ECH
Rops7g00417 7 5219106 5224448 Rops3g00668 3 8138001 8141423 PCT