Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00410 ATGGAAAAGGACAAATCTTTGGGTATTGGGGGTGGTTTGCCACCTCCATCAGGTCGTTATTCAGGTTACTCACCCACTGGAACCCCCTTTAATGTCAAATCTGAACCTTCTTCATCATATCCTCCACTGGTTCCTGGTACCAGCTCAGACTCTAGTGGTGGTGGTGGTGGCTTTAGCCATGATATTAGCAGAATGCCTGATAATCCTCCAAGAAACAGAGGTCATAGGCGTGCTCATTCCGAGATCCTCACCCTACCTGATGATATTAGTTTTGATAGTGACCTTGGTGTAGTTGGAGGTGCGGATGGACCCTCTTTCTCTGATGACACTGAGGAAGATTTATTGTCCATGTACCTTGATATGGATAAATTCAATTCATCATCTGCTACATCAACATTTCAAATGGGTGAGGCATCTAATGCTGCATTGGCAGCTGCAGCTGCTTCTTCAGTGCTGACATCGGGGGCACTGGCAGCACCCACCTCTTCTGAAGAGAATTTTGTTATTGGTACCAATGAAAGGCCCAGAGTTAGACATCAGCATAGCCAATCCATGGATGGGTCAACAACCATCAAACCTGAGATGCTAGTGTCTGGTTCGGAGGACATGTCTGCTGCTGATTCCAAAAAAGCAATGTCAGCAGCCAAGCTTGCAGAACTTGCCTTGATTGACCCCAAGCGCGCAAAAAGGATTTGGGCAAATAGGCAGTCTGCTGCGAGGTCAAAAGAAAGGAAGATGCGCTACATTGCTGAGCTTGAAAGGAAGGTGCAAACATTGCAAACGGAAGCAACATCTTTGTCTGCACAATTAACTCTCTTGCAGAGAGATACAAACGGACTGAATTCTGAGAACAGTGAGCTGAAGCTACGGTTGCAAACCATGGAGCAACAAGTTCACTTGCAAGATGCATTAAACGATGCGTTAAAGGAGGAAATCCAGCATTTGAAAATACTGACTGGGCAAGCTATGCAATCTAATGGAGGACCTATGATGAACTTTGCTTCTTTTGGAGGGGGCCAGCAGTTCTATCCCAATAATCATGCCATGCACACTCTTTTAGCTGCACAACAGTTTCAACAGCTCCAAATTCATCCTCAGAAGCAGCAGCAGCATCAGTTTCAGCAACAAATACAGCAGCAACAAATGCAACAACAGGAACAGCAACAGCAACATCAACAATCAGGGGACTTGAAAATGAGAGCAGCTACAGCTTCTCCAGGCCCCAAAGATAATGCTTCATCAGATGTAAATCCTTCAACAGGCAAGGATTGCTGA 1275 0.4557 MEKDKSLGIGGGLPPPSGRYSGYSPTGTPFNVKSEPSSSYPPLVPGTSSDSSGGGGGFSHDISRMPDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDDTEEDLLSMYLDMDKFNSSSATSTFQMGEASNAALAAAAASSVLTSGALAAPTSSEENFVIGTNERPRVRHQHSQSMDGSTTIKPEMLVSGSEDMSAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLNSENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKILTGQAMQSNGGPMMNFASFGGGQQFYPNNHAMHTLLAAQQFQQLQIHPQKQQQHQFQQQIQQQQMQQQEQQQQHQQSGDLKMRAATASPGPKDNASSDVNPSTGKDC* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00410 424 MobiDBLite consensus disorder prediction 372 399 - -
Rops7g00410 424 Coils Coil 242 311 - -
Rops7g00410 424 CDD bZIP_plant_RF2 227 276 IPR044759 GO:0003700|GO:0006355
Rops7g00410 424 SMART brlzneu 222 286 IPR004827 GO:0003700|GO:0006355
Rops7g00410 424 Pfam bZIP transcription factor 226 284 IPR004827 GO:0003700|GO:0006355
Rops7g00410 424 Coils Coil 370 390 - -
Rops7g00410 424 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 224 287 IPR004827 GO:0003700|GO:0006355
Rops7g00410 424 SUPERFAMILY Leucine zipper domain 226 277 IPR046347 GO:0003700|GO:0006355
Rops7g00410 424 MobiDBLite consensus disorder prediction 21 56 - -
Rops7g00410 424 FunFam probable transcription factor PosF21 225 278 - -
Rops7g00410 424 MobiDBLite consensus disorder prediction 1 77 - -
Rops7g00410 424 MobiDBLite consensus disorder prediction 372 424 - -
Rops7g00410 424 Gene3D - 225 298 - -
Rops7g00410 424 MobiDBLite consensus disorder prediction 407 424 - -
Rops7g00410 424 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 34 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00410 Rops-Chr7 5165905 5170791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00410 19 355 bZIP Transcription Factor Family AT1G06070 74.184 8.64e-172 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops7g00410 bZIP_1 4.3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00410 - - gmx:100786738 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00410 7 5165905 5170791 Rops7g00410 7 5165905 5170791 ECH
Rops7g00410 7 5165905 5170791 Rops3g00660 3 8086545 8087797 PCT