Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00404 ATGAGGCAGCAACAGAACAACCATAGTCACACTTCAACAAGCCGTTCTTCAGATTCCAGCGAGCCCTGTGAAGATGGTAAATGGGCCTCCAAACTTCTGAGGGAGTGTGCCATAGCAATATCTGAGAGGGACTCATCCAAAATCCATCATCTTCTATGGATGTTAAACGAGTTCGCTTCCCCATATGGAGATTGTGATCAGAAATTAGCTTCTTATTTTTTGCAAGCTCTATTTTCAAAGGCCACAGAATCTGGCCAAAAGTGCTATAAGACTCTATCCTCAGTTGCTGAGAAAAACCACTCTTTTGATTCAGCAAGAAAGTTGATACTCAAGTTTCAAGAGGTAAGCCCTTGGACAACCTTTGGACATGTTGCTTCAAATGGTGCCATTTTGGAAGCCTTAGAAGGAGAAACAAAGCTTCACATAATTGATATTAGCAACACCCTTTGCACTCAGTGGCCTACTCTGTTGGAAGCCTTGGCTACAAGAAACGATGAAACTCCTCACTTGAAGCTCACAGTCGTGGAGGTAACAGCTACCAAAGTAGGATCTGTCATGAAGGAAGTTGGCCGAAGAATGGAGAAGTTTGCAAGGCTAATGGGTGTGCCCTTTGAATTGAATGTTATTAGTGGATTAAGTCTTGGAGAGCTCACAAAAGAGGCGTTAGGAGTTCAAGAGGATGAAGCAATAGCTGTGAATTGTATTGGAGCATTGAGAAGAGTAGAAGTTGAAGAAAGGGAAGCTGTGATTCGCATGTTCAAATCACTTAGCCCTCGAGTGGTAACCGTTGTTGAGGAAGAAGCTGATTTTTGCAGCTCAAGAGATGACTTTGTGAAGAGTTTTGAAGAGTGCCTTAGGTTTTACACTCTCTACTTTGACATGCTAGAGGAGAGTTTTCCCCCTACAAGTAATGAAAGATTGATGTTAGAAAGGGAGTGTTCGAGAAGTATAGTTAGGGTTTTGGCTTGCAAAAGTGATGAATTGGAAGATTGTGATTATTGTGAGAGAAGGGAGAGAGGAACTCAATGGTCTGAAAGACTTAGGAGTGCATTTTCACCGGTTGGATTCAGTGATGATGTTGTGGATGATGTCAAAGCATTGCTAAAGAGGTACCAAGCTGGGTGGTCTCTTGTGTTGCCTCAAGGAGATGATCATCTCTCAGGAGTTTACCTCACATGGAAGGAGGAACCTGTAGTTTGGGCATCAGCATGGAAACCCTAG 1221 0.43 MRQQQNNHSHTSTSRSSDSSEPCEDGKWASKLLRECAIAISERDSSKIHHLLWMLNEFASPYGDCDQKLASYFLQALFSKATESGQKCYKTLSSVAEKNHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALEGETKLHIIDISNTLCTQWPTLLEALATRNDETPHLKLTVVEVTATKVGSVMKEVGRRMEKFARLMGVPFELNVISGLSLGELTKEALGVQEDEAIAVNCIGALRRVEVEEREAVIRMFKSLSPRVVTVVEEEADFCSSRDDFVKSFEECLRFYTLYFDMLEESFPPTSNERLMLERECSRSIVRVLACKSDELEDCDYCERRERGTQWSERLRSAFSPVGFSDDVVDDVKALLKRYQAGWSLVLPQGDDHLSGVYLTWKEEPVVWASAWKP* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00404 406 MobiDBLite consensus disorder prediction 1 23 - -
Rops7g00404 406 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 29 395 IPR005202 -
Rops7g00404 406 Pfam GRAS domain family 31 405 IPR005202 -
Rops7g00404 406 MobiDBLite consensus disorder prediction 1 19 - -
Rops7g00404 406 ProSiteProfiles GRAS family profile. 20 405 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00404 Rops-Chr7 5111384 5112950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00404 4 406 GRAS Transcription Factor Family AT4G37650 52.732 5.27e-148 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops7g00404 GRAS 5.8e-98 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00404 - - lang:109357825 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01824 4 42760408 42762084 Rops7g00404 7 5111384 5112950 PCT