Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00384 ATGAACTTGGGTGCAGCCGAGGAAGAATCGGCTGCAGAGGTTCGTGTACCAGCTGAGATTGATTGGCAAAAGCTTGATAAATCAAAGTTTTTCTTCCTTGGTGCAGCACTTTTTTCTGGGGTTTCTGCAATGTTGTACCCTGTTATTGTGTTGAAAACACGTCAGCAAGTAGCTCAATCTCAAGTTTCTTGCATCAAGACTGCATTTTCATTGATCAGGGTTGAGGGCTTTAGAACATTGTATAGAGGATTCGGTACTTCTTTGATGGGTACTATCCCTGCTAGAGCCTTATATATGGCTGCACTTGAGATTACAAAGAGTAATGTAGGTAGTGCCACTGTTAGGTTTGGGATGGCAGAACCAACTGCTGCTACAATTGCCAATGCAGCTGCAGGGTTGAGTGCAGCTGTAGCAGCTCAACTTGTGTGGACCCCAGTTGATGTTGTGAGCCAGAGGTTGATGGTTCAAGGTGGTTCCAATTCACAATATATCAATGGGATTGATGCCTTTAGGAAAATTCTCAAGACAGATGGCCCAAGAGGGTTGTATAGGGGTTTTGGGATATCAATTTTGACCTATGCTCCTTCAAATGCTGTTTGGTGGGCTTCTTATTCTGTGGCACAAAGGATGGTTTGGGGTGGAGTTGGATACTACTTGTGCAAGAAAAATGGTGTTGATGAGAGGAGTGATGTTGCTGCAGGTAATGAATTGAGGCCAGATTCAAAAACAGTGATGGCAGTTCAAGGAGTGAGTGCTGCAATGGCAGGTGGCATGTCTGCTTTGATTACCATGCCATTGGATACCATCAAGACGAGGCTTCAGGTCTTGGATGGTGATGAGAATGGTCGTCGTGGACCAACAGTTATGCAGACAGTGAGGAATTTGGTTAAGGAAGGTGGTTGGATGGCATGTTACAGAGGGTTAGGACCTAGATGGGCTTCAATGTCAATGTCTGCAACAACAATGATCACTACTTATGAGTTCCTAAAACGACTTTCTACGAAAAACCAAGAGGTTTTGACTTAG 1026 0.4435 MNLGAAEEESAAEVRVPAEIDWQKLDKSKFFFLGAALFSGVSAMLYPVIVLKTRQQVAQSQVSCIKTAFSLIRVEGFRTLYRGFGTSLMGTIPARALYMAALEITKSNVGSATVRFGMAEPTAATIANAAAGLSAAVAAQLVWTPVDVVSQRLMVQGGSNSQYINGIDAFRKILKTDGPRGLYRGFGISILTYAPSNAVWWASYSVAQRMVWGGVGYYLCKKNGVDERSDVAAGNELRPDSKTVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTVMQTVRNLVKEGGWMACYRGLGPRWASMSMSATTMITTYEFLKRLSTKNQEVLT* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00384 341 SUPERFAMILY Mitochondrial carrier 23 329 IPR023395 -
Rops7g00384 341 Gene3D Mitochondrial carrier domain 29 339 IPR023395 -
Rops7g00384 341 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 11 338 - -
Rops7g00384 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 210 IPR018108 -
Rops7g00384 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Rops7g00384 341 Pfam Mitochondrial carrier protein 39 108 IPR018108 -
Rops7g00384 341 Pfam Mitochondrial carrier protein 125 211 IPR018108 -
Rops7g00384 341 Pfam Mitochondrial carrier protein 246 336 IPR018108 -
Rops7g00384 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 243 332 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00384 Rops-Chr7 4966877 4968448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00384 1 338 Chloroplast and Mitochondria Gene Families AT1G72820 74.571 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00384 K15121 - gmx:100784616 517.694