Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00381 ATGGCTTCAAATGCAGAAGAAGGGTCCACCATCATCGCCATTGATAGAGACAAGCACAGCCAATACGCTGTCAAGTGGGCTGTTGATCACCTTTTGAAGAGGAACTCCACCTGCACACTCATTCACGTTAGAACCAAGGCCTTGAATCCCCATGAGTTTGATGATTTCCCTAAACAAGGTCGTCCACCAACCGAAGAAGAACTGCACCAGCTTTTTCTTCCCTTCCGAGGATTTTGTGCACGAAAAGGGATCGTAGCACAGGAGTTGGTGCTGCATGACATTGATGTTCCAAGTGCGCTTACTGATTACATCATTGAAAACTCTATCAGCAATATTGTTGTTGGTGCTTCCCGCTGGAATGTTCTCATAAGGAAATTCAAAGATGTAGATGTGCCAACAAGCTTAGTGAGGTCTGTGCCAGGGTCATGCATGGTGCATATTATATCAAAAGGAAAAGTGCAGAATATTCGACCAGCAGGTCGTTCACCAACAAAATCTACAAAAGACAATTCTAGTCCCAAGGGAACCGAAGAATTAAACAGAAAATCATCATTGAAATATGGAATTTGGAAAGGCTCAAACAATGATGGAGAGACTAATCCACCAAGACTATCAAATGAAAGTCACTCCTCACAAAATTCATCAAATCGAAATTCCTTTTCCCGTGCCACTTCACAGCGGCTTGAGACGTCACATGAAAACCATGATGCAGTAGTCAAGAAGTCAAACAGTTTTAGGAGGAACATATCTTCTAAAATGTCCCCAAAAAGCATGGAGATAGAAATAAGGAAATTAAAGCTAGAGCCAATACAGAAGGCAATGGAACCTGAAAAGTTTAAGCTAGAAGGATGGAACATGGAAAAAGCTGGGCTCGCTGAAGAGGCTGCATTGGCTTTAGCAGAGGTAGAGAGGCAGAAAACAAATGCGTCTAAGGAGTCAGCTGAAATGTCAAAAGCCCTGGCAGAAATAAAGACCCAGGAGAGAAAGCGGGATGAAATAAGAGCCATGCATGAGGAAGAAGAGAGGAAGAGAGCATTAACTGCAAGTGCACATAACAATATTCAATTTAGAAGATTTGATATCAATGAAATTGAAGTGGCAACGAATTACTTTGACAATGCTCTCAAAATTGGTGAAGGTGGATATGGACCTGTTTTCAAAGGAATGCTTGATGATCACACTATTGTTGCCGTTAAGGCCTTGAGACCAGGTATAACAACAGAAGGGGAGAAGCAATTCCAACAAGAGGTTAATGTTTTGAGCAGCATAAGACATCCAAACATGGTTCAACTTCTAGGTGCCTGCCCAGAGTACGGATGCCTTGTGTATGAGTACATGGAATATGGAAGTTTAGAAGATCGCCTTTTCCAGAAGGATAACACTCCACCAATTCCATGGAAGATTAGATTCAAAATAGCATCAGAAATAGCCACTGGACTTCTTTTCCTTCACCAGACAAAACCTGAGCCAGTTGTGCATCGTGACCTCAAGCCAGCAAACATTCTCATGGACAAGAACTATGTGAGCAAGATCACTGATGTGGGTTTGGCAAGGCTTGTTCCTCCTTCTGTAGCTAACAAAACCACTCAATACCACAAGACAGCCCCAGGTGGCACATTTTGCTATATTGACCCTGAGTATCAACAAACAGGATTATTGGGTGTAAAATCAGATATATATTCATTAGGTGTAATACTTCTACAGATTATTACTGGAAAGCCTCCTATGGGTGTGGCACGCCTGATTGAGGAGGCTATCCAAAAAGGTAATTTAACAGAGGTGCTTGATCCAAATGTGACAGATTGGCCCCTTGAAGAAACTTTACAATATGCTAAGTTGGCTTTAAAGTGTTGTGAGTTGAGAAAAAGGGACAGACCAAACCTTGGTTCTGTCATTTTGCCAGAGCTGAATCGACTCCGAGGTCTGGGACTGGGAGGAGCTACCACTTACACTCATACATGA 1962 0.4241 MASNAEEGSTIIAIDRDKHSQYAVKWAVDHLLKRNSTCTLIHVRTKALNPHEFDDFPKQGRPPTEEELHQLFLPFRGFCARKGIVAQELVLHDIDVPSALTDYIIENSISNIVVGASRWNVLIRKFKDVDVPTSLVRSVPGSCMVHIISKGKVQNIRPAGRSPTKSTKDNSSPKGTEELNRKSSLKYGIWKGSNNDGETNPPRLSNESHSSQNSSNRNSFSRATSQRLETSHENHDAVVKKSNSFRRNISSKMSPKSMEIEIRKLKLEPIQKAMEPEKFKLEGWNMEKAGLAEEAALALAEVERQKTNASKESAEMSKALAEIKTQERKRDEIRAMHEEEERKRALTASAHNNIQFRRFDINEIEVATNYFDNALKIGEGGYGPVFKGMLDDHTIVAVKALRPGITTEGEKQFQQEVNVLSSIRHPNMVQLLGACPEYGCLVYEYMEYGSLEDRLFQKDNTPPIPWKIRFKIASEIATGLLFLHQTKPEPVVHRDLKPANILMDKNYVSKITDVGLARLVPPSVANKTTQYHKTAPGGTFCYIDPEYQQTGLLGVKSDIYSLGVILLQIITGKPPMGVARLIEEAIQKGNLTEVLDPNVTDWPLEETLQYAKLALKCCELRKRDRPNLGSVILPELNRLRGLGLGGATTYTHT* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00381 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 491 503 IPR008271 GO:0004672|GO:0006468
Rops7g00381 653 PANTHER OS02G0152300 PROTEIN 11 642 - -
Rops7g00381 653 MobiDBLite consensus disorder prediction 154 239 - -
Rops7g00381 653 ProSiteProfiles Protein kinase domain profile. 371 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00381 653 Gene3D Transferase(Phosphotransferase) domain 1 446 641 - -
Rops7g00381 653 SMART serkin_6 371 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00381 653 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 343 445 - -
Rops7g00381 653 MobiDBLite consensus disorder prediction 187 227 - -
Rops7g00381 653 CDD STK_N 9 151 - -
Rops7g00381 653 Gene3D Phosphorylase Kinase; domain 1 340 445 - -
Rops7g00381 653 Coils Coil 292 343 - -
Rops7g00381 653 Gene3D HUPs 9 148 IPR014729 -
Rops7g00381 653 Pfam Universal stress protein family 11 145 IPR006016 -
Rops7g00381 653 CDD STKc_IRAK 377 639 - -
Rops7g00381 653 SUPERFAMILY Protein kinase-like (PK-like) 352 631 IPR011009 -
Rops7g00381 653 Pfam Protein kinase domain 375 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00381 653 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00381 Rops-Chr7 4935539 4939348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00381 10 640 Receptor kinase-like Gene Family AT1G17540 47.640 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Rops7g00381 Pkinase 2.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00381 - - gmx:100814365 850.121