Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00380 ATGGCGTACCAGACCCCCGATCACGAATCAGATTCAGATTCCAAGAACCAAACGCGCCTCTATAACCCTTACAAGGACCTCGAGGTTCCAATTCGAAACCTCTACCAGCTCCCAACCTCCCCTGAATACCTCTTTGATGAGGAGGCTCGCCGCAAGCGTCGATCTTGGGGGGAGAATCTCACCTTCTACACTGGCTGCGGCTACCTTGCCGGAGCTGTCGGCGGCGCCGGCGTTGGCCTCGTTGAAGGTGTAAAATCCTTCGAATCCGGCGACTCCATGAAGCTCCGAGTCAACCGGGTTCTTAACTCGTCCGGTCACTCAGGTCGGGCGTGGGGTAACCGATTGGGTGTGATCGGGTTGCTTTTCGCCGGAATCGAGAGCGGGATTGTGGCGGTGAGAGACACCGATGATGTGTGGAACAGCGTGGCGGCGGGGCTTGGCACCGGAGCTTTGTATCGAGCGGCGAGAGGGGTGAGATCTGCGGCGGTGGCTGGTGCTGTTGGTGGAGCTGTGGTTGGAATTGCTGTTACGGCGAAGCAGGCATTGAAACGTTACGTGCCTATATGA 567 0.5767 MAYQTPDHESDSDSKNQTRLYNPYKDLEVPIRNLYQLPTSPEYLFDEEARRKRRSWGENLTFYTGCGYLAGAVGGAGVGLVEGVKSFESGDSMKLRVNRVLNSSGHSGRAWGNRLGVIGLLFAGIESGIVAVRDTDDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGAVVGIAVTAKQALKRYVPI* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00380 188 PANTHER TIM23 30 177 IPR045238 GO:0022857
Rops7g00380 188 Pfam Tim17/Tim22/Tim23/Pmp24 family 62 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00380 Rops-Chr7 4914110 4914975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00380 7 188 Chloroplast and Mitochondria Gene Families AT1G72750 68.108 2.22e-81 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00380 K17794 - gmx:100813158 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00380 7 4914110 4914975 Rops4g01908 4 44247996 44248556 PCT