Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00370 ATGGAACCTCGCGTTGGGAACAAGTTCCGTCTTGGCCGTAAGATCGGTAGCGGATCCTTCGGCGAGATCTATCTCGGGACAAATATTCAGACAAATGAAGAGGTTGCAATTAAGCTCGAAAATGTCAAAACCAAGCATCCTCAATTGCTGTATGAATCAAAGTTGTATAAAATACTGCAAGGAGGAACTGGGATCCCAAATGTGAGATGGTTTGGCGTTGAGGGAGAATACAATGTCCTTGTGATGGATTTACTAGGCCCTAGTCTTGAGGATTTGTTCAATTTCTGTAGTCGGAAATTGTCCCTCAAAACTGTTCTCATGCTTGCTGATCAGATGATAAATCGGGTTGAATTTATTCATACCAAATCATTTTTACATAGGGACATCAAGCCAGACAACTTCCTCATGGGTTTGGGGAGGCGTGCAAATCAAGTTTATGCCATTGACTTTGGTCTTGCTAAGAAATACAGAGACACCTCTACCCATCAGCATATTCCCTACAGAGAGAATAAGAATTTGACAGGAACTGCTAGATATGCTAGCATGAATACTCATCTTGGAATTGAGCAAAGCCGTAGGGATGACTTAGAATCACTTGGATATGTTCTTATGTATTTTCTGAGAGGAAGTCTTCCGTGGCAGGGATTGAAAGCTGGTACTAAGAAGCAGAAGTACGAGAAAATCAGTGAGAAGAAAGTTTCTACTTCTATTGAGTCTCTCTGTCGTGGCTACCCTTCAGAATTTGCTTCATACTTCCATTACTGTCGGTCACTGCGGTTTGATGATAAACCAGATTATGCATATTTGAAAAGGCTTTTTCGTGATCTTTTCATCCGTGAAGGATTCCAGTTTGATTATATCTTTGATTGGACCATTTTGAAATATCAGCAATCTCAAATTACCACTCCTCCTGCACGTGCCATTGGTCCTGCTGCTGGACCAAGTTCTGGCATGCCACCAGCTATTGTCAATGCTGATAGACTGACAGGTGGGGAAGACGGTAGGCATACTGGTTGGTCTTCATCAGATCGTAGAAGAAACTCTGGACCTATTGCAAATGAGGGAATCTCATCTAGACAAAAAGCCCCAGTTATAAGTGACTCAACTGGATCTAAAGATGTTATGTTGTCTGGTTCTAATTTCTTCCGGTCAAGTGGATCTACAAGGCGAGGTGCTTTTAAAAGCAGTCGTGATGCAGTTGTTGGCAGTGAGGCTGAGCCCTCTCTTCCTCTTCCCATGGATGCTAGCTCAGGAGCACTCCGTAAAATCTCTGGTGCTCAAAGAAGTTCACCGATCACATCATCCGAGCGCAACCGAACATCCTCTGCCAGAAACACATCAAACATGAAGAATATTGAGTCAACTCTCCGAGGAAAGCTGCAACAAGTTGGGAACTGTCACAACAAGTATATAAGAAAGAAGGATATGCCTATGTGGATTTCCTGA 1446 0.4288 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYKILQGGTGIPNVRWFGVEGEYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHTKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYIFDWTILKYQQSQITTPPARAIGPAAGPSSGMPPAIVNADRLTGGEDGRHTGWSSSDRRRNSGPIANEGISSRQKAPVISDSTGSKDVMLSGSNFFRSSGSTRRGAFKSSRDAVVGSEAEPSLPLPMDASSGALRKISGAQRSSPITSSERNRTSSARNTSNMKNIESTLRGKLQQVGNCHNKYIRKKDMPMWIS* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00370 481 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00370 481 CDD STKc_CK1_delta_epsilon 8 282 - -
Rops7g00370 481 Gene3D Transferase(Phosphotransferase) domain 1 1 308 - -
Rops7g00370 481 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00370 481 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Rops7g00370 481 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00370 481 FunFam Casein kinase I isoform delta-like 1 308 - -
Rops7g00370 481 MobiDBLite consensus disorder prediction 309 452 - -
Rops7g00370 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Rops7g00370 481 PANTHER CASEIN KINASE-RELATED 9 428 - -
Rops7g00370 481 FunFam Putative Casein kinase I 1 85 - -
Rops7g00370 481 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Rops7g00370 481 MobiDBLite consensus disorder prediction 422 452 - -
Rops7g00370 481 MobiDBLite consensus disorder prediction 343 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00370 Rops-Chr7 4798908 4803969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00370 7 223 EF-hand Containing Proteins AT2G17890 27.111 9.45e-14 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Rops7g00370 Pkinase 6.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00370 K02218 - gmx:100795570 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00370 7 4798908 4803969 Rops4g01929 4 44648659 44653027 PCT