Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00368 ATGGACCATCACAAAGACAGAATTAAGAGTGGGTGCCAGAATATTTTAGAAGGAATAAATTCAATGTCCTTGGTAAATTTAGATGACCAGCAAGTCCATTCTTTAGTGATGATGAGAGAAATAGCACGTGGGGTTGTTGATGAGCGAGATAGAAAGGTGACTAAGAATGATGTGATTACTGCCTTGCGTTACAGCATCGAGAAAATGGCGTGTGCATCCAGAGATATCATTCAAATATTAAGTAGGATGTCCTATGAAGGCTTGGATGACCAGAGGATGCATTTAGTATTGAGGATGAAGGAAATTGCACATGGGATTATTGATAAACAACCGAGAGTTGCAATAACCAGGCCTGACTTACTTGAGGAACAAGTTGGCTTTGTGGATGAAGGGATGAGAGATAGTCCCATGGTGGAGTCAAGCAAGATCAGCAACGGGGATGTCCTTATTGATGAGGCACAAAGCATGACACATGAAGATGAGATATTGGATGTGGAACATGTTTTAAGATTTGAAAATGGGATAGATGAAGTACAGGAGTCTCTGTTACCACCATGCTTTCAGCAATTTCTTCTGTGGCCTCCTGATGATTGCATCACCTTAGAGTGGGTCCAGGACATGATGTTCACCCTTGAGGAGGCTTCACGAAAGATGTTGCCATCTGAATTCTGTCATGTCGTGCCAACCATTTTGGTGGACAAATTGACAGATGCTTCTCGCAGTATTTTATGTGAAGAACCAAACTGTGTGGAGATTAATTGTCAAGGAGAAGATTCAAGAGTCATTGTTGTAGGCGATGTACATGGGCAGTTTCACGATTTAATGTTTCTTTTGAAGCATGCAGGAGTGCCTTCTGAGAACCAGTTTTATGTTTTCAATGGAAATTATGTAGATAAAGGAGCTTGGGGCATTGAAGTATTTTTGGTCTTGCTGGCTTGGAAGGTCTTGATGCCTCAGAGAGTATATTTACTACGTGGGAATCATGAATCAAGATATTGCACTACAAAATATGGTTTTAAGAAGGAGGTGTGGACCAAATATGGTGATCAAGGTGAAGATGTATACAATAGATTCCTAGAGTGTTTCAAGGAGCTTCCGTTAGCTTCAGTTATTGCCAACTGTGTTTATACTACTCATGGAGGGCTTTTCCGTAGCATTTATGCTGCCCCTTCAGTAAAGCCAAAACGGAAGAAGACACAGAGAGTAGATCTTGGTTCTTTAGCCGAGTTATCTGAAGTTAAAAGAGCTTGTGTAGATTCCCCTTATGAAGGTCCTGACATATTATTGAGTGATGTTCTCTGGTCAAAACCATCTAACAGGGATGGTCTGAGGGAAAATGCAAGCCGAAAATTAGGTTTATGGTGGGGTCCTGATTGTACTGAGGCTTTCTTAAAGCAGCACAATTTAAAGCTGATCATCAGATCACATGAAGGACCTGATGCAAGGGCTGGTAGGGATGATTTTGGGGATATGTTGAGTGGATACAGCATAGATCATGATGGAGAATCGGGAAAGCTATGTACACTTTTTAGTGCTCCAGACTACCCACAGTTTGGGAAAAGGAGATATAACAATAAAGGAGCATATGCAATATTGAAGTTGCCTGATTTTACAAGTCCTTCCTTTCACTCATTCGAATCAGCAGAAAGACCAATGGTGGATCCATATGTTGATTTCAATGCCAATGACATGGACTCGAGTAAACTAGACTCCTCTCTTATCGCCTCAACCTCTGCTTTTTCTGCTCCAAGATTTTATCCAGCTGGGGCAAGACCTGAGTTTGACTTTGAGGCATTAGGCATATGCAATGCCCCTTCTTGGAGTGTTCAGCTTCCTGATGGTTCAGGTGGTACTCAAGTAGTACAGGTTCCAAGGGCTCCTCCACCTTTGGTAGAAGGGTTACCTCTGGCTCCCAACATTCAGGAGCCACACAATTCTGCTTATGAGTATTTGTTGGAGCTTGTTGGTGCCCTGAAACACATGATTGTAACAAGGGAGACTGAGAACAGGGTCCTTGTTTCAGCTTTGCGAAGTAGAGCTAGGAAACGAAAGGGTAGGGGAATCAGTTGA 2070 0.4227 MDHHKDRIKSGCQNILEGINSMSLVNLDDQQVHSLVMMREIARGVVDERDRKVTKNDVITALRYSIEKMACASRDIIQILSRMSYEGLDDQRMHLVLRMKEIAHGIIDKQPRVAITRPDLLEEQVGFVDEGMRDSPMVESSKISNGDVLIDEAQSMTHEDEILDVEHVLRFENGIDEVQESLLPPCFQQFLLWPPDDCITLEWVQDMMFTLEEASRKMLPSEFCHVVPTILVDKLTDASRSILCEEPNCVEINCQGEDSRVIVVGDVHGQFHDLMFLLKHAGVPSENQFYVFNGNYVDKGAWGIEVFLVLLAWKVLMPQRVYLLRGNHESRYCTTKYGFKKEVWTKYGDQGEDVYNRFLECFKELPLASVIANCVYTTHGGLFRSIYAAPSVKPKRKKTQRVDLGSLAELSEVKRACVDSPYEGPDILLSDVLWSKPSNRDGLRENASRKLGLWWGPDCTEAFLKQHNLKLIIRSHEGPDARAGRDDFGDMLSGYSIDHDGESGKLCTLFSAPDYPQFGKRRYNNKGAYAILKLPDFTSPSFHSFESAERPMVDPYVDFNANDMDSSKLDSSLIASTSAFSAPRFYPAGARPEFDFEALGICNAPSWSVQLPDGSGGTQVVQVPRAPPPLVEGLPLAPNIQEPHNSAYEYLLELVGALKHMIVTRETENRVLVSALRSRARKRKGRGIS* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00368 689 PRINTS Serine/threonine phosphatase family signature 360 386 IPR006186 GO:0016787
Rops7g00368 689 PRINTS Serine/threonine phosphatase family signature 505 521 IPR006186 GO:0016787
Rops7g00368 689 PRINTS Serine/threonine phosphatase family signature 323 347 IPR006186 GO:0016787
Rops7g00368 689 PRINTS Serine/threonine phosphatase family signature 260 287 IPR006186 GO:0016787
Rops7g00368 689 PRINTS Serine/threonine phosphatase family signature 290 317 IPR006186 GO:0016787
Rops7g00368 689 Pfam Calcineurin-like phosphoesterase 260 479 IPR004843 GO:0016787
Rops7g00368 689 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 34 676 - -
Rops7g00368 689 SMART pp2a_7 227 549 IPR006186 GO:0016787
Rops7g00368 689 ProSitePatterns Serine/threonine specific protein phosphatases signature. 324 329 IPR006186 GO:0016787
Rops7g00368 689 Gene3D - 210 571 IPR029052 -
Rops7g00368 689 SUPERFAMILY Metallo-dependent phosphatases 223 555 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00368 Rops-Chr7 4755201 4760813 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00368 191 471 Calmodulin-binding Proteins AT5G63870 51.864 2.41e-98 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00368 K04460 - gmx:100779241 957.592