Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00364 ATGGGTGCTTCAGGAAAATGGTTTAAATCACTTCTTCCTCTTAGAAAGACCTCGACTTCAACAACTGATCATCAAGAAAAGGGTGGTGGTGATAACAAGAGTAAGAAGAAGTGGAAGCTATGGAAGACCTCTTCAGAAGGGTCTTCTACCTCCATGAAGAAGGGTGGTGCTGCTGTATCTGATTCTTCTTCGCTTACTGCAGCTGTGGCTGTGGTGGTTCGAGCTCCACCAAAAGATTTCATGGTCATCAAGCAGGAATGGGCTGCCATTCGCATTCAGGCTCTGTTTCGAGCCTTCTTGGCTAGACGAGCTTTGAGGGCCTTGAAGGCAGTGGTAAGGCTGCAAGCTATATTTCGAGGCCGTCTAGTCAGAAATCAAGCTGCTGTTACTCTAAGGTGCATGCAGGCTCTTGTTCGAGTTCAGGCACATGTAAGGGCTAGGAATGTGAGGAACTCTCCAGAAGGGAAAGCAGTGCAGAAGTTATTAGATGAGCATCGCAACCAAGTTGATCCTGTTAAGATGGTTGAGCAAGGATGGTGTGACATTCCTGGAACTGTGGATGAAGTTAAAACAAAGCTAACAATGAGGCAAGAAGGAGCCATCAAGAGGGATAGAGCAATGGCATACTCTCTCGCCACACAGCAATCAAGAGTGAGTGCTAGTCCAAACTCGAAAGCCACTAAGGCAGTGACCCTTCTCAAGCATCACGGCTTAGACAATAAGAGCTTAGGATGTAGCTTGTTAGAGCGCTGGATGGCAACCAAGCCATGGGAGAGTCCAATTTCCAGGAAGAGTGATGACCTTGTTCCTCCCTTTCAATCAAGAAAGAATGGTGTGACAACTAGGATTTCAGTTAAACCTCTTACAACCTGTCAACTAACTTCATCATTTTCGACCTTAAGCTCTGAATACATGTATGATGATAGCTCTGTATCAACTTCATGTACATCTGGGTCTCCATCTCTGCCATCCACCAAAAATGTTACGGTGGAAACAACAGATGAAAGAGATGTTCATCAACCTAGCTACATGAATTTTACAGAATCATCTAAGGCTAAATTGAAAGCTTACAGGTGTTCTTCACAGAATTCAAAGAGACTCGTAACTGAAGACTGTCTGTCACATAGCAGAACAACAGCCTTTCTAAATGGAGATACTAGAAGCAGTTCGGGTTCTGATCCTTCAGTTAATTTATGGAAGGATCTTTGTGCAACACCTCTAAGGGCAAGTTATCAAAAACGATACACTGGAAGATAG 1257 0.4423 MGASGKWFKSLLPLRKTSTSTTDHQEKGGGDNKSKKKWKLWKTSSEGSSTSMKKGGAAVSDSSSLTAAVAVVVRAPPKDFMVIKQEWAAIRIQALFRAFLARRALRALKAVVRLQAIFRGRLVRNQAAVTLRCMQALVRVQAHVRARNVRNSPEGKAVQKLLDEHRNQVDPVKMVEQGWCDIPGTVDEVKTKLTMRQEGAIKRDRAMAYSLATQQSRVSASPNSKATKAVTLLKHHGLDNKSLGCSLLERWMATKPWESPISRKSDDLVPPFQSRKNGVTTRISVKPLTTCQLTSSFSTLSSEYMYDDSSVSTSCTSGSPSLPSTKNVTVETTDERDVHQPSYMNFTESSKAKLKAYRCSSQNSKRLVTEDCLSHSRTTAFLNGDTRSSSGSDPSVNLWKDLCATPLRASYQKRYTGR* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00364 418 MobiDBLite consensus disorder prediction 43 58 - -
Rops7g00364 418 MobiDBLite consensus disorder prediction 1 58 - -
Rops7g00364 418 ProSiteProfiles IQ motif profile. 85 113 IPR000048 GO:0005515
Rops7g00364 418 MobiDBLite consensus disorder prediction 20 42 - -
Rops7g00364 418 SMART iq_5 107 128 IPR000048 GO:0005515
Rops7g00364 418 SMART iq_5 84 106 IPR000048 GO:0005515
Rops7g00364 418 Pfam IQ calmodulin-binding motif 87 106 IPR000048 GO:0005515
Rops7g00364 418 Pfam IQ calmodulin-binding motif 109 126 IPR000048 GO:0005515
Rops7g00364 418 Gene3D - 83 133 - -
Rops7g00364 418 ProSiteProfiles IQ motif profile. 109 136 IPR000048 GO:0005515
Rops7g00364 418 PANTHER IQ-DOMAIN 5-RELATED 1 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00364 Rops-Chr7 4729046 4731678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00364 1 402 IQD Protein Family AT1G72670 45.370 1.26e-95 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00364 - - gmx:100788715 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00364 7 4729046 4731678 Rops4g01963 4 45342372 45345096 PCT