Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00346 ATGGCAACCAAAGGAGAAGAACTACCCAGTCCCAAAAGGGTCCAATACCCATTGGACTCTTGCTCCTACGACATCCTCGACGAGATTGGAGCTGGTGTAAGTGCCGTAGTCTACAAGGCAATATGTGTTCCCATGAACTCTTCACCAGTAGCAATCAAATCCATAGACCTTGATCGTTTACGCCCTGACTTTGATGATGTTCGACGTGAAGCTAAGACCCTTTCTCTTCTTTCTCATCCCAACATCCTGAAAGCTCACTGTTCCTTCACCGTTGATCGTCATCTTTGGGTGGTGATGCCATTCATGGCTGGTGGATCTTTACAATCCATCATCTCTCATTCATTCCCTGATGGTTTAGCTGAACCATGCATCGCTGTGGTTCTCAAAGAGACTCTGAATGCTCTTTCTTATCTTCATGGTCAAGGTCATCTTCATAGAGATATCAAAGCTGGTAACATCCTTGTTGACTCAAATGGGTCAGTGAAGCTTGCAGATTTTGGTGTCTCTGCCTCCATTTATGAAATTGGAGCACCAAGCTCTTCATCTTCTTCCTCTCTTATGCTCACTGATTTTGCTGGCACACCATATTGGATGGCTCCTGAGGTTATTCACTCTCACAGAGGTTACAGTTTCAAGGCTGATATATGGTCTTTTGGGATAACTGCTTTGGAGTTAGCACATGGAAGACCACCACTTTCTCATCTTCCACCTTCCAAGTCAATGATGCTCAAGATCACCAAGAGATTTCGGTTTTCAGATTTAGACAAATATAGGAAGGAGCATGGCAAGAAATTCTCCAAGGCCTTCAAGGACATGGTGGCTTCTTGCCTTGATCAAGACCCTTCCAAGAGACCCACTGCTGAGAAATTGCTCAAGCATCCCTTCTTCAAGAACTGCAAGGGCTCGGAATTCTTAGTGAAGAATGTGCTGCAAGGATTGCCTAGTGTTGAAAAAAGATATAAAGAAAGCAAGGTTCTGCAAGCAACAAGTAACGAGGAAGATGATGATGATGACCCAATGATGAACCAAAACGTGAAGCAGAGAAGGATCAGTGGTTGGAACTTCAATGAAGATGGCTTGAAACTCGACCCAGTATTCCCAAACGACGAAACAGTCCTCAAAGAAGTTCGATTTGGAGGTGAAACGGTTATCCAAGACACGGGTGGTGGCAAGATAGGTGAGTTAGAAGAGCAAGCCGTGGCTGCATCAGGAACCATGAAAGAGCCAAACCCTAGTGCTGCTCATGTGGAAGTGGTGGGGAAATTAGTGGGTATTCATGGAGAGGAAAAAGCTGTGAACAACAAGGAAGCCATGTTGGCCACTCTGAATGTATTAAAAGGGAGCTTGGAACAAGAGTTGGGGCAAGTAAAGTTTCTGATGAATCTGATACAAGGAGAAGAGACTCAAGTGGCTGATAGTAGTGAGGAGCAAATGGCACAGGAGATTTCAAGGCTGAGGACTGAATTGGAAAATGAGAGGAAGAAGAACTTGCAGCTGGAGACCTTCAAGCTTCAGCTTTCTTATGGTTCTAATAGTTCTAAATTCTGA 1548 0.4451 MATKGEELPSPKRVQYPLDSCSYDILDEIGAGVSAVVYKAICVPMNSSPVAIKSIDLDRLRPDFDDVRREAKTLSLLSHPNILKAHCSFTVDRHLWVVMPFMAGGSLQSIISHSFPDGLAEPCIAVVLKETLNALSYLHGQGHLHRDIKAGNILVDSNGSVKLADFGVSASIYEIGAPSSSSSSSLMLTDFAGTPYWMAPEVIHSHRGYSFKADIWSFGITALELAHGRPPLSHLPPSKSMMLKITKRFRFSDLDKYRKEHGKKFSKAFKDMVASCLDQDPSKRPTAEKLLKHPFFKNCKGSEFLVKNVLQGLPSVEKRYKESKVLQATSNEEDDDDDPMMNQNVKQRRISGWNFNEDGLKLDPVFPNDETVLKEVRFGGETVIQDTGGGKIGELEEQAVAASGTMKEPNPSAAHVEVVGKLVGIHGEEKAVNNKEAMLATLNVLKGSLEQELGQVKFLMNLIQGEETQVADSSEEQMAQEISRLRTELENERKKNLQLETFKLQLSYGSNSSKF* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00346 515 FunFam Serine/threonine-protein kinase BLUS1 105 339 - -
Rops7g00346 515 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 15 373 IPR047173 GO:0043539
Rops7g00346 515 FunFam Serine/threonine-protein kinase BLUS1 12 101 - -
Rops7g00346 515 ProSiteProfiles Protein kinase domain profile. 23 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00346 515 SMART serkin_6 23 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00346 515 Gene3D Phosphorylase Kinase; domain 1 12 101 - -
Rops7g00346 515 SUPERFAMILY Protein kinase-like (PK-like) 22 330 IPR011009 -
Rops7g00346 515 ProSitePatterns Protein kinases ATP-binding region signature. 29 53 IPR017441 GO:0005524
Rops7g00346 515 Coils Coil 475 495 - -
Rops7g00346 515 Gene3D Transferase(Phosphotransferase) domain 1 105 348 - -
Rops7g00346 515 Pfam Protein kinase domain 23 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00346 Rops-Chr7 4503668 4505504 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00346 13 498 MAP Kinase Kinase Kinase Kinase AT4G14480 56.883 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Rops7g00346 Pkinase 8.4e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00346 K08835 - gmx:100820227 690.263