Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00341 ATGATTGAGATGTACCACCGTCCGATAAATGTTAAAGCCAATACAGAAAGAGGAAACTTGGGTGTCTCCAACCTAAACCATTCTTCTGCCATTACCAGAATTTCTTTGGCATCTACATTTTGCTTCAGCATATGCTGCTGTTATCACCAAACTCCCTTCAATTTTCTTCTCCTTGGGTTGTCGGTGAAAGCTGAGAGATCTTCAGAATTGATCTCCAATCCTTTTAGAAGGAAAATGGGATTGTTGCTTATTTTCCTGCTAATTAAGCTACATTTAGTTATCAGTACTCCACAGCTTCATGAATATGGAGCCAACAATCCGCAGCATTGGAGAACCAGAAGCCATTCAAGTATTGCATTCCCACCATTGAAGTCATCTTCTGGAGTTCCTGCAAGTATTGCACTTCCACCTTCAAAGGCATTTTCCAGTGTTCCGGGAAGTATTGCACTTTCACCTTCCGAGTCATTCCCCAAAGTTCCTACAAAGAAATGGATGCATCGTTCTGTGGATTCTCCAGTATCACACCATAAGCATCACTATTCCAGAACTAAGTCCAGAAACCAAACTCCTGGGCCAATATATCCAATCCATCCTAATACTCATCAAGGTCCTCCGGTCTTAAAGTCAGGACCTCCTTTCTCTTCACCTATGAGATGGGGTTTTCATGCACCTGCACCATCACCAGCAGTTCCATCAGACCACTTAAAGATGCCCTCTCCTTCGCCTAGAATTTCACCTCTAGGTTCATCCTTGAAGAAAACAAAGACTCCACCACCAGCGTATGCTTTGGTGCTGCCACCCTCACAGCCTGATAAGGATTGCATGTCGGTGACTTGCTCAGAGCCCTTGACCTATACACCTCCTGGATCACCTTGTGGTTGTGTATGGCCACTTCAAGTTAAACTCCGCATCAGCATTGCAATATACAAGTTTTTTCCTTTGGTTTCTGAGTTAGCCAATGAAATTGCAGCCAGTGTTTTGCTGAACCGTAATCAAGTGCGCATTGTGGGAGCAGATGCAGCTAGTCAGCAGCAACTAGAGAAAACTACTGTTCTCATAAGCTTGGTACCCCAAGGAGTAAAATTTGATGATACAACTGCCTTTTTAATATATAAGAAATTCTGGCACAGGGAGATTCTCTCTGATGCTTCACTCTTTGGTGCTTATGAAGTTCTCTATGTTCATTATCCAGGTCTTCCACCATCTCCACCTTCAACTCCGTCTAGCGTTTCTGGTATAGATGTTGAACCATACCCTGGTCGTGGAAATGACGGAACAATTGTGAAACCTTTAGGAGTAGATGTCTCGAGGAAGAAAAAAGAAGGGAGTAGTGGAAGAATGGTTATCATCATTGTGTTGTCATCTATTTCTGCGTTTGTTTTATTCATTGGACTTGCTTGGATTTGTCTTTTGAAATGCGGTTCCTGCGGTCTTGAACCTGAACAAGTTCCAGATGTTATATTTTCATCCTCCTCAAAGCGAACACCCTCAGGGATTTCTCGGTCATTGACTTATGGGAGCATGCCAGGTTCTAGATCACTGTCCTTCAATTCTGGAACAATAACATATACAGGATCAGCTAAGATCTTTACTTTGAATGAAATAGAGAAAGCAACAGATAACTTCAATTCTTCAAGAATATTAGGAGAAGGTGGCTTTGGTCTTGTTTACAAAGGTGGCCTATATGATGGGAGGGATGTGGCAGTGAAGATTCTCAAGAGAGATGATCATCATGGTGGTCGTGAATTCTTAGCAGAAGTTGAGATGCTTGGCCGCTTGCACCATAGAAATTTAGTTAAACTGATAGGTATATGCATAGAGAAACAAACTCGCTGCCTAGTCTATGAGCTTGTCCCTAATGGCAGCGTGGAATCCCACTTACATGGTGCTGACAAGGAAACGGATCCACTTGATTGGAATGCCCGGATGAAGATTGCACTTGGTGCAGCTCGGGGATTGGCTTATTTGCATGAAGATTCAAATCCATGTGTCATACACAGGGACTTCAAGTCCAGCAACATCTTGTTGGAATATGATTTTACACCCAAGGTTTCAGATTTTGGATTGGCTAGAACAGCATTGGATGAGGGAAACAAGCACATCTCCACACATGTTATGGGAACATTTGGCTACCTAGCTCCTGAATATGCAATGACCGGCCATCTTCTTGTGAAAAGTGATGTTTACAGCTATGGAGTTGTACTCCTTGAGCTCCTAACTGGAAGAAAACCTGTGGATTTGTCACAACCACCAGGTCAAGAAAACCTTGTTGCTTGGGTTCGTCCACTTCTCACAAGTACGGAGGGTTTGCAGAAGATCATAGACTCGGTTATAAAGCCTAACATTTCACTTGATAGTGTGGTAAAAGTTGCAGCAATTGCATCCATGTGTGTGCAACCAGAAGTCACTCAACGTCCTTTCATGGGTGAAGTTGTTCAGGCCTTGAAGCTGGTTTGTAGTGAGTTTGAGGCAACAAGCCATGTAAGATCGAGTTTTCGAGAAGATGGTCTTCTAACTGATGTAGAAGGGAAATTTTCCAGAGTTTCAGGTGAGAGAGTGGAGTTTTCAGTGTAA 2574 0.4297 MIEMYHRPINVKANTERGNLGVSNLNHSSAITRISLASTFCFSICCCYHQTPFNFLLLGLSVKAERSSELISNPFRRKMGLLLIFLLIKLHLVISTPQLHEYGANNPQHWRTRSHSSIAFPPLKSSSGVPASIALPPSKAFSSVPGSIALSPSESFPKVPTKKWMHRSVDSPVSHHKHHYSRTKSRNQTPGPIYPIHPNTHQGPPVLKSGPPFSSPMRWGFHAPAPSPAVPSDHLKMPSPSPRISPLGSSLKKTKTPPPAYALVLPPSQPDKDCMSVTCSEPLTYTPPGSPCGCVWPLQVKLRISIAIYKFFPLVSELANEIAASVLLNRNQVRIVGADAASQQQLEKTTVLISLVPQGVKFDDTTAFLIYKKFWHREILSDASLFGAYEVLYVHYPGLPPSPPSTPSSVSGIDVEPYPGRGNDGTIVKPLGVDVSRKKKEGSSGRMVIIIVLSSISAFVLFIGLAWICLLKCGSCGLEPEQVPDVIFSSSSKRTPSGISRSLTYGSMPGSRSLSFNSGTITYTGSAKIFTLNEIEKATDNFNSSRILGEGGFGLVYKGGLYDGRDVAVKILKRDDHHGGREFLAEVEMLGRLHHRNLVKLIGICIEKQTRCLVYELVPNGSVESHLHGADKETDPLDWNARMKIALGAARGLAYLHEDSNPCVIHRDFKSSNILLEYDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWVRPLLTSTEGLQKIIDSVIKPNISLDSVVKVAAIASMCVQPEVTQRPFMGEVVQALKLVCSEFEATSHVRSSFREDGLLTDVEGKFSRVSGERVEFSV* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00341 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 664 676 IPR008271 GO:0004672|GO:0006468
Rops7g00341 857 SUPERFAMILY Protein kinase-like (PK-like) 521 815 IPR011009 -
Rops7g00341 857 Pfam Protein tyrosine and serine/threonine kinase 545 815 IPR001245 GO:0004672|GO:0006468
Rops7g00341 857 PANTHER OS01G0750732 PROTEIN 266 831 - -
Rops7g00341 857 ProSiteProfiles Protein kinase domain profile. 542 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00341 857 MobiDBLite consensus disorder prediction 167 190 - -
Rops7g00341 857 Gene3D Transferase(Phosphotransferase) domain 1 618 835 - -
Rops7g00341 857 ProSitePatterns Protein kinases ATP-binding region signature. 548 570 IPR017441 GO:0005524
Rops7g00341 857 Gene3D Phosphorylase Kinase; domain 1 515 617 - -
Rops7g00341 857 MobiDBLite consensus disorder prediction 228 256 - -
Rops7g00341 857 CDD STKc_IRAK 548 816 - -
Rops7g00341 857 FunFam receptor-like serine/threonine-protein kinase ALE2 515 617 - -
Rops7g00341 857 FunFam Receptor-like serine/threonine-protein kinase ALE2 618 832 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00341 Rops-Chr7 4475803 4483113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00341 271 846 Receptor kinase-like Gene Family AT5G56890 63.167 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Rops7g00341 PK_Tyr_Ser-Thr 7.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00341 - - gmx:100775318 1211.05