Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00327 ATGTTTATGAGCCCAAAGAAGCAAGATACTGGTGTAGAGGAAGAAGATACAAGATCCATCTCAACTAAAGATGCTACAGCTAGTATTGCTCAGACACCCCTATCCTCACTGACATACATTGTAACCAAACGAGAACCAGTTCCAGAGGACCAACAACGTGATCTCTTCAAGTGGATTTTGGAAGATGCAGATGAGAAACACCTAATTGATGGAGAGAAAGCTCTGCTTAAACATAACAGAAGGATTAGACTCAAAACCAAACACATAAATCAACTTCCATTAGGCACTTTTGGATGGCCTTTTATCGGTGAAACCGTTGAGTTTGTTTCTTGTGCTTACTCTGATCGCCCTGAAAGCTTCATGGACAAGAGACGCCGCATGTATGGGAAGGTATTTAAGTCACACATATTTGGAAGTCCTGCTATTGTTTCCACGGATGCTGATGTTAATAAATTTATTCTGCAAAGTGATGCAAAGGTTTTTGTTCCTTCTTATCCCAAGTCTCTGACAGAGTTGATGGGGGAGTCTTCTATTTTGCTCATCAATGGAAGCCTACAGAGGAAAATACATGGACTTATTGGAGCTTTCTTCAAGTCTCAACAGCTTAAGGCTCAGATTACCAGAGACATGCAAAAGTATGTGCAAGAATCAATGGCAAAATGGAAGGAAGACCAACCCGTATACATACAAGATGAAACCAAAAATATTGCCTTTCAAGTATTAGTCAAGGCATTGATTAGTTTGGATCCAGGTGAAGAAATGGAGCTTCTGAAGAAACATTTTCAGGAATTCATCTCTGGCCTCATGTCTTTACCCATAAACCTGCCAGGAACTAAACTTTATCAATCTTTACAGGCAAAAAAGAAAATGGTCAAATTAGTGCAGAGAATTATTCAAACTAGAAGAAATAGTAGCATCTCCAAAGTTCCAAAAGATGTAGTGGATGTGCTTCTGAATGATGCAAGTGAGCAATTAACAGATGATTTAATAGCAGATAATATGATTGATATGATGATTCCAGGAGAGGACTCTGTGCCAGTTCTTATGACTCTAGCTATCAAGTATCTATCAGAATGCCCTGCTGCTTTGGAACAATTAACGGAGGAAAATGTGAAGCTTAAGAAACTCAAGGATCAGCTTGGGGAGTCCTTGTGTTGGAGCGATTACTTATCATTGCCATTTACTCAAACAGTTATCACGGAAACTTTGAGGATAGGAAATATAATAATTGGTGTTATGAGAAAGGCCATGAGAGATGTTGAAATAAAAGGGTATTTAATACCAAAAGGATGGTGTGTATTTGCATATTTTAGATCAGTTCATCTAGATGACCAAAACTATGATTGGCCTTACCAATTCAATCCATGGAGGTGGCAAGACAAAGACATTAGCAGTTGCAATTTCACTCCCTTTGGAGGGGGACAAAGGCTATGTCCTGGCCTTGACTTGGCCAGGCTGGAGGCTTCTATCTTCCTACACCACTTTGTTACTCAATTCAGGTGGTATGCTGAAGAAGATACAATTGTGAACTTCCCTACTGTAAGAATGAAAAGGAGGATGCCAATCTTTGTGAGGAGAGTGGAATCTTGA 1590 0.3956 MFMSPKKQDTGVEEEDTRSISTKDATASIAQTPLSSLTYIVTKREPVPEDQQRDLFKWILEDADEKHLIDGEKALLKHNRRIRLKTKHINQLPLGTFGWPFIGETVEFVSCAYSDRPESFMDKRRRMYGKVFKSHIFGSPAIVSTDADVNKFILQSDAKVFVPSYPKSLTELMGESSILLINGSLQRKIHGLIGAFFKSQQLKAQITRDMQKYVQESMAKWKEDQPVYIQDETKNIAFQVLVKALISLDPGEEMELLKKHFQEFISGLMSLPINLPGTKLYQSLQAKKKMVKLVQRIIQTRRNSSISKVPKDVVDVLLNDASEQLTDDLIADNMIDMMIPGEDSVPVLMTLAIKYLSECPAALEQLTEENVKLKKLKDQLGESLCWSDYLSLPFTQTVITETLRIGNIIIGVMRKAMRDVEIKGYLIPKGWCVFAYFRSVHLDDQNYDWPYQFNPWRWQDKDISSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTQFRWYAEEDTIVNFPTVRMKRRMPIFVRRVES* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00327 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 471 480 IPR017972 GO:0005506|GO:0016705
Rops7g00327 529 PANTHER CYTOCHROME P450 26 91 502 - -
Rops7g00327 529 Pfam Cytochrome P450 95 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops7g00327 529 Coils Coil 363 383 - -
Rops7g00327 529 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 82 527 - -
Rops7g00327 529 Gene3D Cytochrome P450 83 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops7g00327 529 MobiDBLite consensus disorder prediction 1 25 - -
Rops7g00327 529 SUPERFAMILY Cytochrome P450 90 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops7g00327 529 PRINTS E-class P450 group I signature 125 144 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops7g00327 529 PRINTS E-class P450 group I signature 436 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops7g00327 529 PRINTS E-class P450 group I signature 478 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops7g00327 529 PRINTS E-class P450 group I signature 396 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops7g00327 529 PRINTS E-class P450 group I signature 468 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops7g00327 529 CDD CYP90-like 124 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00327 Rops-Chr7 4228940 4236837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00327 88 500 Cytochrome P450 AT3G13730 68.421 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00327 K12638 - gmx:100797868 808.135