Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00321 ATGAGTCGAGAACAACATAAGCGAGGGAAGCAAGAAAAAGGTTCTGATGGTGCTGAGAAGGTTATTGTTGCCGTCAAGGCATCAAAGGAAATTCCAAAGACTGCTCTTATTTGGTCTCTGACTCATGTTGTTCAACCTGGGGATTGCATTACATTGCTAGTGGTTGTACCTTCACAAAGTTCAGGCCGAAGACTATGGGGTTTTCCAAGGTTTGCTGGTGACTGTGCGAGTGGTCACAAGAAGTCAACTCCAGGAACAAGTTCAGAACAGAAGAATGATATCACTGATTCTTGCTCTCAAATGATCCTTCAGCTCCATAATGTCTATGATCCTAATAAGATAAATGTCAAGATTAAAATTGTTTCTGGATCACCCTGTGGAGCAGTGGCTGCAGAAGCCAAGAAAGCACAAGCCAGTTGGGTCGTATTAGACAAACAGCTCAAACACGAGGAAAAACAATGCATGGAAGAGCTGCAGTGCAACATTGTGGTGATGAAGCATTCCCAGCCTAAGGTACTCCGCTTGAATTTGGTTGGATCACAAAAGAAGGATCATGAAGAAGCATGTCCATTACCTTCTAAGCAAAGTGAGATGCCTGGAAAACAAACCAAGAAGAAGAATGATACTTTAGATTCCATAAAAGGATCAGTTGTTACTCCAACTAGCAGCCCCGAGCTAGGGACTCCATTTACTGCAACTGAAGCTGGCACTTCATCAGTTTCAAGCTCTGATCCAGGAACTTCACCATTTTTTGTCTCTGAGATGAATGCCGAGTCAAAGAAAGAGGAAACTATAAAAGAAAATCAAGAACTTGATGATACTATTTCAGACTCAGACAGTGAAAATTTGTCCACGTCTTCAGCAAGCTTGAGATTCCAGCCGTGGATCACAGATTTACTTTTACATCAGCAATCATCTCAACGTACAGAAGAAAGATCAGAGAGATCTCATAATAGGATCGAATCGTCTACAGCAAGAGCTTTTCGAGAGAAATTCTCAAGGCTTGATAGAGAAGCTGAAATTGAAATCTCAACCTATAAGAATGACTTGGATTTCAGTGGAAGTGTAAGAGAAGCAATATCATTATCTAGACATGCCCCTCCTGGTCCACCTCCTTTATGTTCAATATGTCAACACAAGGCTCCTGTTTTTGGAAAACCTCCAACATGGTTCAGCTATGCTGAGTTGGAACTTGCCACTGGTGGATTTTCACAAGCCAATTTCTTGGCAGAAGGAGGTTTTGGATCTGTTCATAGAGGGATTCTACCAGATGGACAAGTCATTGCGGTCAAGCAACATAAATTGGCTAGTTCGCAGGGTGATATTGAATTTTGTTCAGAGGTAGAAGTCCTAAGCTGTGCTCAGCACCGAAATGTTGTTATGTTGATTGGCTTCTGTATAGAGGATAAGAGAAGGCTCTTGGTTTATGAGTACATATGTAATGGATCATTGGATTCTCATTTATATGGGAGACAACGGGAACCATTAGAATGGTCTGCACGGCAAAAAATTGCTGTTGGAGCTGCTCGAGGGTTGCGATATCTTCATGAAGAGTGCAGAGTGGGTTGCATCATCCACCGTGACATGCGGCCTAACAACATTCTTATCACTCATGATTTTGAACCACTGGTTGGTGATTTTGGACTCGCAAGGTGGCAGCCTGATGGAGACACAGGAGTGGAAACTAGAGTAATCGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGTGGCCAAATAACTGAAAAGGCTGATGTTTATTCATTTGGGGTGGTATTGGTGGAGCTTGTTACAGGGCGAAAAGCTGTGGATCTCAATAGACCGAAGGGACAACAGTGTCTTACTGAGTGGGCACGGCCACTGTTAGAAGAATATGCCATTGAGGAACTGATTGATCCAAGTTTGGAAAGTCACTACTCAGAGCATGAGGTCTCCTGCATGCTACATGCTGCATCATTATGCATAAGCCGTGATCCTTATTCTAGACCACGCATGTCACAGGTTCTGCGAATACTGGAGGGTGACATGGTCATGGACACGAATAGCATTTCAACTCCTGCTTATGATGTAGGAAACCGGAGTGGTTGA 2091 0.4309 MSREQHKRGKQEKGSDGAEKVIVAVKASKEIPKTALIWSLTHVVQPGDCITLLVVVPSQSSGRRLWGFPRFAGDCASGHKKSTPGTSSEQKNDITDSCSQMILQLHNVYDPNKINVKIKIVSGSPCGAVAAEAKKAQASWVVLDKQLKHEEKQCMEELQCNIVVMKHSQPKVLRLNLVGSQKKDHEEACPLPSKQSEMPGKQTKKKNDTLDSIKGSVVTPTSSPELGTPFTATEAGTSSVSSSDPGTSPFFVSEMNAESKKEETIKENQELDDTISDSDSENLSTSSASLRFQPWITDLLLHQQSSQRTEERSERSHNRIESSTARAFREKFSRLDREAEIEISTYKNDLDFSGSVREAISLSRHAPPGPPPLCSICQHKAPVFGKPPTWFSYAELELATGGFSQANFLAEGGFGSVHRGILPDGQVIAVKQHKLASSQGDIEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQREPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIEELIDPSLESHYSEHEVSCMLHAASLCISRDPYSRPRMSQVLRILEGDMVMDTNSISTPAYDVGNRSG* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00321 696 MobiDBLite consensus disorder prediction 212 254 - -
Rops7g00321 696 Gene3D Transferase(Phosphotransferase) domain 1 479 686 - -
Rops7g00321 696 FunFam Dual-specific kinase DSK1-like 12 166 - -
Rops7g00321 696 PANTHER OS01G0750732 PROTEIN 154 680 - -
Rops7g00321 696 SUPERFAMILY Protein kinase-like (PK-like) 387 680 IPR011009 -
Rops7g00321 696 Pfam Protein kinase domain 407 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00321 696 ProSitePatterns Tyrosine protein kinases specific active-site signature. 524 536 IPR008266 GO:0004672|GO:0006468
Rops7g00321 696 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 375 478 - -
Rops7g00321 696 MobiDBLite consensus disorder prediction 305 323 - -
Rops7g00321 696 Coils Coil 254 274 - -
Rops7g00321 696 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 479 682 - -
Rops7g00321 696 MobiDBLite consensus disorder prediction 303 323 - -
Rops7g00321 696 CDD STKc_IRAK 409 675 - -
Rops7g00321 696 Gene3D Phosphorylase Kinase; domain 1 375 478 - -
Rops7g00321 696 ProSiteProfiles Protein kinase domain profile. 403 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00321 696 MobiDBLite consensus disorder prediction 256 273 - -
Rops7g00321 696 MobiDBLite consensus disorder prediction 181 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00321 Rops-Chr7 4125768 4131667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00321 383 692 Trihelix Transcription Factor Family AT1G70460 52.500 4.70e-103 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Rops7g00321 Pkinase 2.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00321 - - gmx:100789216 1258.43