Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00298 ATGGCAAAGGGTTGTGCGGTGGTGAGCAAAAGTTCGCCCGAATGCTTGAGGGATGTAGAAACAAGTGTTGATGTTATGGTTGCTTTGTTGCAAGGCTTCATTAGTGTTGACTGTGGACTCGTTGATGAACCAAGCTACACAGATGAAACAACTTCCATCTATTACACTTCTGATGCCAACTTCACAGACAGTGGTGTAAGCCACAGCATATCACCTAAATATAAGGCTTCCCTTGAAAGGCAGTTCTGGAATGTTAGAAGCTTCCCTGGAGGAACCAGGAACTGCTATACCCTTTTTGTTCCTCAAGGAAGTAGCAACAAATATTTAGTAAGGGCCAGGTTTGTATATGGAAATTATGATGGCAAAGACTCTCTTCCAGAATTTGATATCTATCTTGGATCCAAATGGTGGAATTCGGTGGTGTTTGAGGATGCATCCAGTGTGATAACCAAGGAAATCATTTATGCTGCTTCATCAGATTATGTTCATGTTTGCCTATTTAACACCAACAAGGGTACACCTTTTATTTCAGTTTTAGAGCTTAGAGTTCTTAACAGTGATGCCTATCTAGTTAACACTCTGGAGCTGTTGGGGCGGTTTGATTTAGGCTTACAGGATGGTGAGATAGTCAGATATCCATATGATATCTATGACAGAACATGGACACCTTATAAATCAATTCACTGGAAACAGATAGATACCACACTCACCATAGACCAGGGAGCACTTTCATTCAATTTTTTACCATTACCACCTTCCATTGTCATGAGAACAGCAGCAATTCCAGCAAATGCCAGCGACAATATAGAATTTCACTTCCTTCCCAAGGATAATGCCTCCGCATATTATGTGTACTTTTACTTTGCTGAAATCCAGAAGCTGCAGGCAAATCAAATTAGAGAGTTCAACATTTTTGTAAATGGGGAGCTTCTTAATAATGCTCCAGTCAATCCTTCATACCTGCAGAGCCTGTATCATGTCTCAGGTTTTTTTAAACCTCGGTTGGAACTTTGGATTAACAAAACTAGTAGATCAACTCTTCCACCTCTCTTCAATGCCATCGAGATATATATGACAAAGGACTTCTCACAATCACAAACATATCAAACAGATGTTGATGCTATCATAAATATCAAGTCAATTTATGGGATCAAGAGAAACTGGCAAGGAGATCCTTGTACTCCACTAGCTTACTTGTGGGATGGTCTTAACTGCAGCAATGCTGGATCTGGCTCACCAAGGATCACATACTTGAACTTATCTTCCAATGGTTTGATTGGAAATATAGCTTCTGGTATATCCAATCTGAAGTTAATAGAATTTTTGGATTTGTCAAACAACAATTTGACTGGCGCGGTGCCTGATTTCCTATCTCAATTGGGATTCTTGAGAGTTCTAAACCTGGAAGGAAATCATCTATCAGGAACAATTCCAATGCAACTCATTGTGCGTTCAGAGAATGGTTTGCTGGAATCCAATTTTGGTGGAAATCCAAATCTTTGCTCCCCAGGTTCATCATGCAACAAGAATGAGAATAAGGTTGCAGTTGCACTAGGGGCATCGCTTGGTGGAGCTTTCATGATACTAGCAGTCGCAGTGATTTCTTTCCGAATGTACAACAGGAGAGGAGTTTCCCCTCATCCGAGCAAGCTGGGTATTTATTCCAGAATAAAGGAAGAACTGGGGTCAAATAAACAAGAATTCACCTATGCTGAAGTGTTGAGCATGACCAGAAACTTTGAAAGGGTTGTGGGGAAAGGAGGATCTGGAACAGTCTACCATGGCCGTGTAGATGATACTGAGGTAGCTGTCAAAATGCTCTCTCCCTCAGCTCCAGGATATTTGCAATTTGAGGCAGAGGCCAAACTTCTTGCTATAGTTCATCATAAATGCTTGACTGCTCTTATAGGGTACTGTGATGATGGCACTAACATGGCTCTGATCTATGAGTATATGGCTAATGGAGACTTAGCCAATCACTTATCAGATAAAAGTGAAAATATATTGGGTTGGAATCAACGACTTCAAATTGCTGTGGATGCCGCTGAAGGATTGGAGTATCTGCATCATGGCTGCAATCCACCAATAGTTCACAGAGACGTTAAATCTAAAAACATATTGCTAAATGAAAAATTCCAGGGCAAACTAGCAGATTTTGGGTTGTCAAAGATCTTCCCTAATGAAGGTGACACCCATATGTCCACTGTGGTTGCTGGAACCCCGGGATATCTAGACCCACAGTACAATATATTAAAGAGGTTGAATGAAAAAAGTGATGTTTTCAGTTTTGGGGTAGTTTTGCTTGAGATAATTACGGGCCAACCTGCCATAACCAAAACTGAAGAAAGAACTCACATAATTCAATGGGTTGGTTCCATGTTGGTCCAAGAGGAGGTCAAAGATATAGTGGATCCCAGATTACTTGGAGAATTTGATATTGATTCTGCAAAGAAAGCCTTAGATACTGCAATGGCTTGTGTAGCACCCACTTCCATTAATAGGCCAACCATGAGCTATGTGGTTATGGAACTGAAACAATGTTTGGCAAAGAAGGTGGAGGAGACTCATCCATCTGAATCTGACAGTCATGAGAGTTTACAGAGCAGCTTAAACACTGGCAGTGTCTCCTTTGATATAATTAGTGGAGAGAGCTCTCTAGCAAGGTAG 2667 0.4094 MAKGCAVVSKSSPECLRDVETSVDVMVALLQGFISVDCGLVDEPSYTDETTSIYYTSDANFTDSGVSHSISPKYKASLERQFWNVRSFPGGTRNCYTLFVPQGSSNKYLVRARFVYGNYDGKDSLPEFDIYLGSKWWNSVVFEDASSVITKEIIYAASSDYVHVCLFNTNKGTPFISVLELRVLNSDAYLVNTLELLGRFDLGLQDGEIVRYPYDIYDRTWTPYKSIHWKQIDTTLTIDQGALSFNFLPLPPSIVMRTAAIPANASDNIEFHFLPKDNASAYYVYFYFAEIQKLQANQIREFNIFVNGELLNNAPVNPSYLQSLYHVSGFFKPRLELWINKTSRSTLPPLFNAIEIYMTKDFSQSQTYQTDVDAIINIKSIYGIKRNWQGDPCTPLAYLWDGLNCSNAGSGSPRITYLNLSSNGLIGNIASGISNLKLIEFLDLSNNNLTGAVPDFLSQLGFLRVLNLEGNHLSGTIPMQLIVRSENGLLESNFGGNPNLCSPGSSCNKNENKVAVALGASLGGAFMILAVAVISFRMYNRRGVSPHPSKLGIYSRIKEELGSNKQEFTYAEVLSMTRNFERVVGKGGSGTVYHGRVDDTEVAVKMLSPSAPGYLQFEAEAKLLAIVHHKCLTALIGYCDDGTNMALIYEYMANGDLANHLSDKSENILGWNQRLQIAVDAAEGLEYLHHGCNPPIVHRDVKSKNILLNEKFQGKLADFGLSKIFPNEGDTHMSTVVAGTPGYLDPQYNILKRLNEKSDVFSFGVVLLEIITGQPAITKTEERTHIIQWVGSMLVQEEVKDIVDPRLLGEFDIDSAKKALDTAMACVAPTSINRPTMSYVVMELKQCLAKKVEETHPSESDSHESLQSSLNTGSVSFDIISGESSLAR* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00298 888 SUPERFAMILY L domain-like 370 500 - -
Rops7g00298 888 SUPERFAMILY Protein kinase-like (PK-like) 564 844 IPR011009 -
Rops7g00298 888 Gene3D Phosphorylase Kinase; domain 1 555 651 - -
Rops7g00298 888 ProSitePatterns Protein kinases ATP-binding region signature. 584 605 IPR017441 GO:0005524
Rops7g00298 888 ProSitePatterns Serine/Threonine protein kinases active-site signature. 696 708 IPR008271 GO:0004672|GO:0006468
Rops7g00298 888 PANTHER OS07G0107800 PROTEIN-RELATED 34 853 - -
Rops7g00298 888 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 652 856 - -
Rops7g00298 888 Pfam Malectin-like domain 36 358 IPR024788 -
Rops7g00298 888 Gene3D Transferase(Phosphotransferase) domain 1 652 872 - -
Rops7g00298 888 Gene3D Ribonuclease Inhibitor 373 491 IPR032675 -
Rops7g00298 888 Pfam Leucine rich repeat 413 473 IPR001611 GO:0005515
Rops7g00298 888 CDD STKc_IRAK 584 846 - -
Rops7g00298 888 SMART serkin_6 578 848 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00298 888 FunFam Leucine-rich repeat receptor-like kinase 370 503 - -
Rops7g00298 888 Pfam Protein tyrosine and serine/threonine kinase 580 790 IPR001245 GO:0004672|GO:0006468
Rops7g00298 888 ProSiteProfiles Protein kinase domain profile. 578 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00298 Rops-Chr7 3791455 3799846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00298 32 850 Receptor kinase-like Gene Family AT2G19210 48.395 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Rops7g00298 Malectin_like 9.8e-100 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00298 - - gmx:100778537 1341.64