Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00297 ATGCATGGCGTCACTGGCAATATTAGTTCGGGTTTGCCATTTGGTTCATCATGCAACAAGAAGAATGGGAATACGATTGCAGTTGCACTGGGGGTATCGCTTGGTGGGGCTTTCATGCTACTAGTAGTCGCCGTGATTTCTTTCCGAATTTACAACCTTAGACAAGTTTCCCCTCATCCGAGCAAGCCGAGAGTTTATTCCAGAATAAAGGCGGAAATGGGGCCAAGTAAACAAGAATTCACCTATGCTGAAGTAATGAGCATGACCAGAAACTTCGAAAGGGTTGTGGGAAAAGGAGGATCTGGAACAGTCTACCATGGCCGTGTAGATGATACTGAGGTAGCTGTCAAAATGCTCTCTCCCTCAGCTCAAGGATATTTGCAATTTGAGGCAGAGGCCAATCTTCTTGCTCTAGTTCATCATAAATGCTTGACTGCTCTTATTGGGTACTGCGATGATGGCACTAACATGGCTTTGATCTATGAGTATATGGCTAATGGAGACTTAGCCAATCACTTATCAGGATTGGAGTATCTGCATCATGGCTGCAATCCACCAATAGTTCACAGAGACGTTAAATCTAAAAACATATTGCTAAATGAAAAATTCCAAGGTAAACTTGCTGATTTTGGGTTGTCAAAGATCTTCCCTAATGAATGTGACACCCATATGTCCACTGTGGTTGCTGGAACTCCAGGATATCTAGACCCACAGTACAATATGTTAAAGAGGTTGAATGAAAAAAGTGATGTTTTCAGTTTTGGGGTAGTTTTGCTTGAGATAATTACGGGCCAACCTGCCATAACCAAAACTGAAGAAAGAACTCACATAATTCAATGGGTTGGTTCCATGTTGGTCCAAGAGGAGGTCAAAGATATAGTGGATCCCAGATTACTTGGAGAATTTGATATTGATTCTGCAAAGAAAGCCTTAGATACTGCAATGGCTTGTGTAGCACCCACTTCCATTAATAGGCCAACCATGAGCTATGTAGTTATGGAATTGAAACAATGTTTGGCAAAGGTGGTGACTCATCCGTCTAAATCTGATAATCATGAGAGTTTATCGAACGGCTTAATCATTAACACCGTCTCCTTTGATGGAATTAGTGGAGAGAGCTCTCTAGAAAGGTAG 1134 0.4189 MHGVTGNISSGLPFGSSCNKKNGNTIAVALGVSLGGAFMLLVVAVISFRIYNLRQVSPHPSKPRVYSRIKAEMGPSKQEFTYAEVMSMTRNFERVVGKGGSGTVYHGRVDDTEVAVKMLSPSAQGYLQFEAEANLLALVHHKCLTALIGYCDDGTNMALIYEYMANGDLANHLSGLEYLHHGCNPPIVHRDVKSKNILLNEKFQGKLADFGLSKIFPNECDTHMSTVVAGTPGYLDPQYNMLKRLNEKSDVFSFGVVLLEIITGQPAITKTEERTHIIQWVGSMLVQEEVKDIVDPRLLGEFDIDSAKKALDTAMACVAPTSINRPTMSYVVMELKQCLAKVVTHPSKSDNHESLSNGLIINTVSFDGISGESSLER* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00297 377 SMART serkin_6 90 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00297 377 Pfam Protein kinase domain 93 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00297 377 PANTHER OS07G0107800 PROTEIN-RELATED 19 344 - -
Rops7g00297 377 ProSitePatterns Protein kinases ATP-binding region signature. 96 117 IPR017441 GO:0005524
Rops7g00297 377 Gene3D Transferase(Phosphotransferase) domain 1 164 360 - -
Rops7g00297 377 ProSiteProfiles Protein kinase domain profile. 90 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00297 377 SUPERFAMILY Protein kinase-like (PK-like) 73 335 IPR011009 -
Rops7g00297 377 Gene3D Phosphorylase Kinase; domain 1 76 163 - -
Rops7g00297 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00297 Rops-Chr7 3782777 3793714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00297 25 340 Receptor kinase-like Gene Family AT1G51890 51.437 8.94e-119 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Rops7g00297 Pkinase 5.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00297 - - gmx:100778537 532.332