Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00292 ATGGCTGAAAAATGGAGATTCCATTGGGCTTGGAGCTGCTGCGTGATCTGGTTTGTCCTTGCATCAGTGTATACCGTTTCAGAATTTACTGAAAAATCCTTAGTAATGGCCACAGAGATGAACTCTATGCATCACAAACAAGGCAGAAGAAAACTAGATGATGTAGCTGGCTCCATTTGCATTGACTGTGGGCTACCTCAAGGGCTAGTCTATACTGATGACAAAACTCAGATACCTTACACTTCGGATACTAAGTTCATTGATACCGGAACAAGCAAAAACGTATCCTTCAAGTTCATTTCTGAAACACCCCAAAGAACATTTCAAACTGTGAGAAGCTTTCCTCTGGGTAAAAGGAATTGCTACACACTAAGACATCCAGAAGGCAAAGATACTATCTACTTGATCAGAGCTTCTTTCATGTATGGGAATTATGATGACTTGAATCAGCTGCCTCAATTTAATCTTTATATTGGGGTTAATTTATGGGACACTCTGAGGTTTGACAATGCCACTCATGTAGTAATCAAGGAGATTTTACACGTGCCATTGATGGATAATTTATATGTTTGTTTATTGAACACTGATTCCGGAACCCCTTTTATATCAGCACTGGAGGTGAGGCATTTCCAACATTCCAGTTATAGAACCAACTCTGGACCTTTAGCTCTATATAGACGTTTTGACATTGGCTCAACAACCAATGAAATAGTGAGGTTTGACAAAGATGTCTATGATCGAATATGGTTTCCTTACAACTTGCCTGATTCCACACCACTCAATACTTCCTACACCATTGACTCCTTGAACCATACTGCATATCACTTGCCATCAACAGTAATGAAAACTGCTGTGAGGCCAACAAATGATAATGATTCCCTGGAATTTGAATTTGACACCGGACATCCTGCTTCAGAGTCCTATGTTTACATGCACTTTGCGGAAATTGAGGAGCTTCAGGAAAATGAAAACAGGGAATTTGACATTACATTGAATGGCAACTTATGGGCTGAGTCAGTAACTCCTAATTATTTGCACTCAACTACAATAGATGGTCAGTCCATTAGGGGATCTAAGCTCATGTTCTCTATGCACAAGAAACCAAATTCCACCCATCCTCCCATACTAAATGCAATTGAAATTTACATTGTCAAACAATTCTTGCAGGCGCCTACAGACCAAGAAGATGTTAAGGCTATCATGGACATCAAATCATATTACCTGTCGTCGTCGTCGAGGGGTAAATCATGGCAAGGAGATCCTTGTGCACCACTGAACTCCTCTTGGAATGGACTCAAATGCAGCGATAATGGATATGAGTCGCCCAGAATAACTGCCTTAAACCTAGCCTCCAGTGGATTGGGTAGCACAATAATAGCATCATTTTTGGAGCTCAAATTCTTGGAATCCTTGGATTTATCAAACAATAGCTTAACAGGACCGCTGCCTGATTTATCACAACTGCAATACTTGAAGGCTCTCAATTTATCAGGGAACAGGTTCTCAGGTGAAATTCCTTCACTTCTCAAGGAAAGATCAATTAATGGTTCACTTTTATTGAGTGTGGATCCGGATCTCTGCCCAGTAGCCTCATGCAAAGGGGACAAAAAGAATATTGTCCCACTTGTTGCAGGCATTGTTTCATCAGTGATCTTTTCTATTGTACTGGGTATTGTACTCACTATCATTTGGAGAAGAAGAAGCAACAGAAAACCAGCGTCAAAGAAAGGTGTGAAATCAAGCGAAGAATTCGTACTGAAGTCAAACAATAAACAGTTCACGTACTCTCAGATATTGGCTATTACCAATAACTTTGAGGAAATGATTGGGAAGGGAGGATATGGAATTGTTTATCATGGTTCCTTAAATGATGGCACCCAAGTTGCTGTCAAAATGCTCTTGCCAAAATCATCTCAGGGGTCTCAGCAGTTTCAGACTGAGGGTCAACTCTTGATGCGAGTACATCATAGGAACCTGGTTTCCTTCCTTGGATACTGTAATGAAGTTGGACACACTGCTATCATCTGCGAATACATGGCTTACGGGAACTTAGAGGAGTATCTTTCAGATTCAAGGAGAGAACCGTTGAGTTGGAGACAAAGGATTCAGATAGCAGTTGATGCTGCTCAAGGTCTCGAGTACTTGCATCGTGGCTGCAAGCCGCCAATAATCCATAGAGACATTAAGACTGCAAACATTTTAGTGAACGAGAAAATGCAAGCAAAAGTAGCTGATTTTGGCGTCTCAAAATTTTTCTCTACTGAAAGTGAAAGTCATATATCAACAACAGTTATTGGCACATTTGGATATCTTGATCCAGAATACTACACATCCAGCAGGCTGACTGAGAAAAGCGATGTTTATAGTTTTGGCATTGTGCTTTTGGAGCTTATTACTGGGCAGCCAGCCATAAGAAAAGGTAACGAGAACACTCACATTGTACAATGGGTTAGCCACTTTCTTGCAAGGGGAGATATTCGACAAATTGTTGACCCAAAGATGCAGGGAGATTTTGATTTTGGTTCTATGTGGAAGGCTGTGGAGGCAGCAATTGCTTGCGTGCCTCCACTATCTATCCAAAGGCCATCGATGAGTTACATTGTCACGGAACTGAAAGAGTCCTTAGAAATGGAAGCAGCTCGGGAACAAGAAGGTATCAGTGAGCAAATTTTGAAATCAAACTCGTTTGAAATGAATGTTGTTGACCTTGAAGCTAATGATGGCCCAGATGCAAGATGA 2739 0.4096 MAEKWRFHWAWSCCVIWFVLASVYTVSEFTEKSLVMATEMNSMHHKQGRRKLDDVAGSICIDCGLPQGLVYTDDKTQIPYTSDTKFIDTGTSKNVSFKFISETPQRTFQTVRSFPLGKRNCYTLRHPEGKDTIYLIRASFMYGNYDDLNQLPQFNLYIGVNLWDTLRFDNATHVVIKEILHVPLMDNLYVCLLNTDSGTPFISALEVRHFQHSSYRTNSGPLALYRRFDIGSTTNEIVRFDKDVYDRIWFPYNLPDSTPLNTSYTIDSLNHTAYHLPSTVMKTAVRPTNDNDSLEFEFDTGHPASESYVYMHFAEIEELQENENREFDITLNGNLWAESVTPNYLHSTTIDGQSIRGSKLMFSMHKKPNSTHPPILNAIEIYIVKQFLQAPTDQEDVKAIMDIKSYYLSSSSRGKSWQGDPCAPLNSSWNGLKCSDNGYESPRITALNLASSGLGSTIIASFLELKFLESLDLSNNSLTGPLPDLSQLQYLKALNLSGNRFSGEIPSLLKERSINGSLLLSVDPDLCPVASCKGDKKNIVPLVAGIVSSVIFSIVLGIVLTIIWRRRSNRKPASKKGVKSSEEFVLKSNNKQFTYSQILAITNNFEEMIGKGGYGIVYHGSLNDGTQVAVKMLLPKSSQGSQQFQTEGQLLMRVHHRNLVSFLGYCNEVGHTAIICEYMAYGNLEEYLSDSRREPLSWRQRIQIAVDAAQGLEYLHRGCKPPIIHRDIKTANILVNEKMQAKVADFGVSKFFSTESESHISTTVIGTFGYLDPEYYTSSRLTEKSDVYSFGIVLLELITGQPAIRKGNENTHIVQWVSHFLARGDIRQIVDPKMQGDFDFGSMWKAVEAAIACVPPLSIQRPSMSYIVTELKESLEMEAAREQEGISEQILKSNSFEMNVVDLEANDGPDAR* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00292 912 ProSiteProfiles Leucine-rich repeat profile. 467 489 IPR001611 GO:0005515
Rops7g00292 912 FunFam Leucine-rich repeat receptor-like protein kinase 579 678 - -
Rops7g00292 912 Pfam Malectin-like domain 61 383 IPR024788 -
Rops7g00292 912 CDD STKc_IRAK 609 873 - -
Rops7g00292 912 Gene3D Ribonuclease Inhibitor 395 518 IPR032675 -
Rops7g00292 912 SUPERFAMILY L domain-like 424 509 - -
Rops7g00292 912 Pfam Protein tyrosine and serine/threonine kinase 605 815 IPR001245 GO:0004672|GO:0006468
Rops7g00292 912 FunFam Leucine-rich repeat receptor-like kinase 395 521 - -
Rops7g00292 912 ProSitePatterns Protein kinases ATP-binding region signature. 609 631 IPR017441 GO:0005524
Rops7g00292 912 SUPERFAMILY Protein kinase-like (PK-like) 580 871 IPR011009 -
Rops7g00292 912 SMART serkin_6 603 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00292 912 Gene3D Phosphorylase Kinase; domain 1 585 678 - -
Rops7g00292 912 PANTHER OS07G0107800 PROTEIN-RELATED 59 875 - -
Rops7g00292 912 Gene3D Transferase(Phosphotransferase) domain 1 679 898 - -
Rops7g00292 912 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 679 884 - -
Rops7g00292 912 ProSiteProfiles Protein kinase domain profile. 603 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00292 912 ProSitePatterns Serine/Threonine protein kinases active-site signature. 723 735 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00292 Rops-Chr7 3720105 3725193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00292 51 887 Receptor kinase-like Gene Family AT2G19210 47.474 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Rops7g00292 Malectin_like 3.7e-109 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00292 - - gmx:100791717 1471.83