Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00282 ATGGGCAAAGCTACCAGGTGGTTGAAGGGTTTGTTGGGAATGAAGAAAGAGAAGGACCACTGTGACAATTCGGGCTCATTGGATCCTTGCAAGAAGGAGAAGAAACAGTCAGGGAAGGATGATCCGAGTCATGTCACTCCAACCAGTAATCCTGCCTTTGATAATGCTTGGCTCAAATCCTATGTTGCTGAAGAAGAGGATGTGCAGAACAAACACGCAATTGTTGTGAGGTCATTAAGCGATGGCAGAGGAAGATTGTTTGGTGGAAGGAGGGAGAGGTGGGCTGCTGTGAAGATCCAAACTTTTTTCAGAGGTTATTTGGCGCGAAAGGCTCTTAGAGCACTCAAAGGATTGGTTAAGATACAGGCTCTTGTTAGAGGGTATCTAGTTCGAAAAAGGGTTGCTGCAACTCTTCACAGTATGCAAGCTCTGATAAGAGCTCAGGCAGCTGTCCGATCACAAAGAGCTCGTCGTTCCATGAACAAAGAAAATATATTTCAACCAGAAATTCGTGCAAGAAAATATATGCCAAGGTTTGATGAAACAAGAAATGAATTACAGAGTAAAAGACTACCCACATCTCATGAGAGTAGATTTGTTCAGAGCCCGAAAGTTGTTATGATTGACACTCGCAGTCACAGGTCATGTTCAAGATCTAGGTGCATTACATCTACAATGTCTGAATGTGGAGAAGACATGCATTATGAAGCAACACCATCATCTCTTCCTTGTCCAGTTCCGGGTCGAATCTCAGTTTATGAATGCCAACATCCTCAAGATTCTGAATGGTACTTCAATTTTGATGAACGTAAATTCTCCACAGCTCAGAACACGCCTCGTTTATCAAATTGTATGCTACCTAATGCCCCAGCTACTCCAGTGAAGAGTGTTTGTGGAGACACCTTATTTCGGCCTTGCTCCAATTTCCCTAGCTACATGGCTAATACTCAATCTTCTAAGGCAAAACTAAGATCTCACAGTGCTCCAAAGCAAAGACCTGAGCCCAAGAAAAGGCTTCCACTCAATGAAATAATGGCCGCGAGAAACAGCATAAGTGGTGTTAGAATGCAGTGGTCATCCAATTCACTAGCTCAAGAATACTGA 1104 0.433 MGKATRWLKGLLGMKKEKDHCDNSGSLDPCKKEKKQSGKDDPSHVTPTSNPAFDNAWLKSYVAEEEDVQNKHAIVVRSLSDGRGRLFGGRRERWAAVKIQTFFRGYLARKALRALKGLVKIQALVRGYLVRKRVAATLHSMQALIRAQAAVRSQRARRSMNKENIFQPEIRARKYMPRFDETRNELQSKRLPTSHESRFVQSPKVVMIDTRSHRSCSRSRCITSTMSECGEDMHYEATPSSLPCPVPGRISVYECQHPQDSEWYFNFDERKFSTAQNTPRLSNCMLPNAPATPVKSVCGDTLFRPCSNFPSYMANTQSSKAKLRSHSAPKQRPEPKKRLPLNEIMAARNSISGVRMQWSSNSLAQEY* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00282 367 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 134 IPR027417 -
Rops7g00282 367 MobiDBLite consensus disorder prediction 18 51 - -
Rops7g00282 367 Pfam IQ calmodulin-binding motif 119 133 IPR000048 GO:0005515
Rops7g00282 367 Pfam IQ calmodulin-binding motif 93 113 IPR000048 GO:0005515
Rops7g00282 367 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
Rops7g00282 367 SMART iq_5 114 135 IPR000048 GO:0005515
Rops7g00282 367 SMART iq_5 91 113 IPR000048 GO:0005515
Rops7g00282 367 MobiDBLite consensus disorder prediction 18 41 - -
Rops7g00282 367 MobiDBLite consensus disorder prediction 317 339 - -
Rops7g00282 367 Gene3D - 118 165 - -
Rops7g00282 367 Gene3D - 58 117 - -
Rops7g00282 367 Pfam Protein of unknown function (DUF4005) 273 352 IPR025064 -
Rops7g00282 367 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Rops7g00282 367 PANTHER IQ-DOMAIN 5-RELATED 1 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00282 Rops-Chr7 3649897 3651548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00282 1 356 IQD Protein Family AT3G16490 47.475 1.67e-94 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00282 - - gmx:100797686 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00282 7 3649897 3651548 Rops7g00282 7 3649897 3651548 ECH
Rops7g00282 7 3649897 3651548 Rops4g02096 4 47383942 47385783 PCT