Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00273 ATGACTCGGCGGTGCTCTCACTGCAGCAACAACGGCCACAACTCCCGGACATGCCCGTCGAGGGGTGGTGGTGGAGGAGGAGGAGTGAAGCTGTTTGGGGTGAGGCTGACGGATGGATCAATAATAAAGAAGAGCGCAAGCATGGGGAGCCTAACCCTGTTGGCTCATCACCATTCTTCCGTGGCTGCTTCATCGCCCAATCCAAGTTCCCCATGCTCCGACCAGCCCCATGAGCCTGATGGATACTTGTCCGATGACCCGACCCATGCCTCCACCTTCGCTAACCACCGTGGAGAAAGGAAGAAAGGTGTTCCATGGACTGAAGAAGAACATCGGCTTTTCTTAATTGGTCTCCAGAAGCTGGGCAAAGGAGACTGGCGTGGGATAGCACGTAATTTTGTTGTGTCAAGGACCCCTACTCAAGTAGCAAGTCATGCCCAGAAGTACTTCATTCGTCAGAGTAATGCTACCAGGAGAAAGAGACGTTCCAGCCTGTTCGACATGGTTCCGGATATGTCTTCAGATCCACCTTCAGTGCCAGAAGAACAAGTACTACTTCCACCTTCTGACAACTCACAACCTTGTAATGGAAAATCACAGCCTTCATTAGATCTGTCTCTCAAGTCAGAATTTGAACCCATGGAAATTACTTCCCAAGAAAATGTGGAAGAGCACAATGAAACTAATATGATGGGATCAGACGGATTTACACCAATGGCTCCTGGATTCTACCCAGCTTATTTACCTGTCCCATTTTCCATATGGCCATCAGCTTCAGCTCCCTTTGAAGAAGTTAACAGAGGAGAGACATCTCATCATGAGGTCCTCAAGCCAATCCCGGTCATTCCCAAGGAACCTGTCAATGTTGATGAGCTTGTGGGAATGTCTCATCTGAGCATTGGGGAAACACAGGTACATGATAGAGAGCCTTCGCCCCTTTCCTTAAAGTTGTTAGGAGAGCCCTCAAGGCAGTCAGCATTCCATGCAAATGCTCCAGGTGGTGGTTCGGATTTGAACAGTGGCAAGAACAGCGCAATTCAAGCGATTTGA 1050 0.4924 MTRRCSHCSNNGHNSRTCPSRGGGGGGGVKLFGVRLTDGSIIKKSASMGSLTLLAHHHSSVAASSPNPSSPCSDQPHEPDGYLSDDPTHASTFANHRGERKKGVPWTEEEHRLFLIGLQKLGKGDWRGIARNFVVSRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMVPDMSSDPPSVPEEQVLLPPSDNSQPCNGKSQPSLDLSLKSEFEPMEITSQENVEEHNETNMMGSDGFTPMAPGFYPAYLPVPFSIWPSASAPFEEVNRGETSHHEVLKPIPVIPKEPVNVDELVGMSHLSIGETQVHDREPSPLSLKLLGEPSRQSAFHANAPGGGSDLNSGKNSAIQAI* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00273 349 CDD SANT 105 150 IPR001005 -
Rops7g00273 349 MobiDBLite consensus disorder prediction 185 203 - -
Rops7g00273 349 Gene3D - 104 155 - -
Rops7g00273 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 98 154 IPR017930 -
Rops7g00273 349 ProSiteProfiles Myb-like domain profile. 98 150 IPR001005 -
Rops7g00273 349 MobiDBLite consensus disorder prediction 61 104 - -
Rops7g00273 349 MobiDBLite consensus disorder prediction 325 349 - -
Rops7g00273 349 MobiDBLite consensus disorder prediction 1 24 - -
Rops7g00273 349 Pfam Myb-like DNA-binding domain 105 150 IPR001005 -
Rops7g00273 349 SUPERFAMILY Homeodomain-like 100 155 IPR009057 -
Rops7g00273 349 ProSiteProfiles SANT domain profile. 106 154 IPR017884 -
Rops7g00273 349 FunFam transcription factor MYB1R1 104 155 - -
Rops7g00273 349 NCBIfam myb-like DNA-binding domain, SHAQKYF class 101 153 IPR006447 GO:0003677
Rops7g00273 349 MobiDBLite consensus disorder prediction 167 203 - -
Rops7g00273 349 MobiDBLite consensus disorder prediction 1 18 - -
Rops7g00273 349 PANTHER TRANSCRIPTION FACTOR KUA1 3 264 - -
Rops7g00273 349 SMART sant 102 152 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00273 Rops-Chr7 3534392 3537842 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Rops7g00273 Myb_DNA-binding 7.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00273 - - gmx:778036 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00273 7 3534392 3537842 Rops7g00273 7 3534392 3537842 ECH