Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00259 ATGGCATCCATTTTGGTCGTTCTATGCACTTGTGTGATCATTTTCTTGGCTGCCACCAATACTTCTGTTGAAGCTGGCAGGCAATTCAAAGTTGGTGATCACTTTGGTTGGCATGAACCTGCCCCCAACAATACTGCATTTTATATCCAATGGGCTGAAAGGAACAGATTTCAAATTGGAGATTCTCTGGTTTTTGAGTACCAGAATGACTCAGTTCTTACCGTGGAGAAATTGGATTACTTTAATTGTGACACAAGTGACCCCATCACTGCCTTTGACAATGGAAAGAGCATTGTCAACCTTGACAGTTCTGGGGCTTTCTACTTCATCAGTGGAACTGATGATCATTGCAAAAACGGGCAAAAATTACTTGTGGAGGTGATGTCCCCACATCCAATTAAAAAATCTCCACCCTCCATTTCAGTTCCACCTGAAGGTTCCTCAGCAATGGCTCCTTCACCCTCTGATGGCTTAGAGGTTTCAGCCTCTTCCATGGTGCTTAGTTCCATTTTTATTATGTCTCCTTTGGTCTTATTTGTTATTGTGATGTTTTGA 555 0.4216 MASILVVLCTCVIIFLAATNTSVEAGRQFKVGDHFGWHEPAPNNTAFYIQWAERNRFQIGDSLVFEYQNDSVLTVEKLDYFNCDTSDPITAFDNGKSIVNLDSSGAFYFISGTDDHCKNGQKLLVEVMSPHPIKKSPPSISVPPEGSSAMAPSPSDGLEVSASSMVLSSIFIMSPLVLFVIVMF* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00259 184 ProSiteProfiles Phytocyanin domain profile. 27 129 IPR003245 GO:0009055
Rops7g00259 184 SUPERFAMILY Cupredoxins 26 128 IPR008972 -
Rops7g00259 184 CDD OsENODL1_like 27 128 IPR041846 -
Rops7g00259 184 MobiDBLite consensus disorder prediction 131 155 - -
Rops7g00259 184 Pfam Plastocyanin-like domain 44 121 IPR003245 GO:0009055
Rops7g00259 184 FunFam Early nodulin-like protein 1 26 132 - -
Rops7g00259 184 Gene3D - 27 137 IPR008972 -
Rops7g00259 184 PANTHER BLUE COPPER PROTEIN 22 144 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00259 Rops-Chr7 3391600 3392545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00259 2 141 Phytocyanin Superfamily AT1G79800 47.917 3.99e-45 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00259 - - gmx:102664880 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00259 7 3391600 3392545 Rops7g00259 7 3391600 3392545 ECH