Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00242 ATGATGGCTGGGAACCCTAACTGGTGGAACATGCATCCACCATCTTTGATGCCTCCCCAATATGTGCTTGGATCTTCTTCAATGCCTTTTAATTCTTTGACAGAAAATCCAGAACCTCCTCAATCATGGAGCCAACTGCTTTTTACTGGATTACCGGGGGAAGAAGAGAGATTAGGTTTCAGTCATTTTCAACCTAAAAACACAGAAAACTGGGATGTCCAAATTCTCAATCCATCTTCCAGAGTTCCTATTCTGGATGTAATAAAACAGGAAGCTTCTCAAAGTGGCAATTTGTACGGCCATGGGCGTGAGGAATTTCAGGCTTGTGGACCAGTCTCATCTTGGTCACAAATGGTGCCAGTTTCTTCCCCAAGGTCTTGTGACACTAGCTTGAGTAGTAATCACATATTGGATTTCACTTATAACAAGGCAGATCATAGGAAAAATCAACTACCAGATCAAACATCTGAGTGTAATAGTACAGCCACTGTTGGAGTTTGTAAGAAGGCTAGGGTTCAACCATCTTCAAGCCAAGCACCTCTGAAGGTGCGGAAGGAGAAGCTAGGTGATAGAATAGCAGCCCTTCACCAATTAGTTTCGCCATTTGGAAAGACTGACACGGCTTCTGTCTTGTTAGAAGCCATTGGATATATCAGGTTCCTGCAGGGTCAAATTGAGGCACTCAGCTCTCCTTACTTGGACAATGCATCAAAAAACATGAGGAATCAACAGTCTGTACATGGAGAAAGAAATTCTGTATTTCCTGAGGACCCCGGTCAGCTGTTGAATGACAATGGCCTAAAAAGAAAGGGAGCTCCAAACCAGGAAGCAGAAGATAAGCCGAAGGACTTAAGGAGTAGAGGGTTGTGTCTGGTCCCTGTGTCTTGCACCCAACATGTTGGAAACGAAAATGGGGCCGATTACTGGGCACCCGCATATGGCAGTGGATTTTAA 954 0.4434 MMAGNPNWWNMHPPSLMPPQYVLGSSSMPFNSLTENPEPPQSWSQLLFTGLPGEEERLGFSHFQPKNTENWDVQILNPSSRVPILDVIKQEASQSGNLYGHGREEFQACGPVSSWSQMVPVSSPRSCDTSLSSNHILDFTYNKADHRKNQLPDQTSECNSTATVGVCKKARVQPSSSQAPLKVRKEKLGDRIAALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLDNASKNMRNQQSVHGERNSVFPEDPGQLLNDNGLKRKGAPNQEAEDKPKDLRSRGLCLVPVSCTQHVGNENGADYWAPAYGSGF* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00242 317 Gene3D - 182 247 IPR036638 GO:0046983
Rops7g00242 317 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 48 299 - -
Rops7g00242 317 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 182 233 IPR036638 GO:0046983
Rops7g00242 317 FunFam Transcription factor bHLH123 family 182 245 - -
Rops7g00242 317 CDD bHLH_AtbHLH_like 182 229 IPR045239 -
Rops7g00242 317 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 172 221 IPR011598 GO:0046983
Rops7g00242 317 MobiDBLite consensus disorder prediction 240 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00242 Rops-Chr7 3235117 3238164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00242 1 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 40.303 2.48e-46 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00242 - - gmx:100802121 527.324