Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00222 ATGGGCTTCTCGGAAAGTCCAGTTATGGCCCAAAACCAATTTAACAAAGAGCAATCCAGAATTGGGCTGCCACATAGCTCCTTCGCTGCATCACATAGGGTTTCAGCATCTGCTTCAATGGGGAAGGGGACAGGGAGCTTTGGAAAAAGGAGGAACAAGACCCACACTCTCTGTGTGAGGTGTGGCCGCCGCAGCTTCCACCTCCAGAAGAGTCGCTGCGCCGCTTGCGCTTTCCCCGCTGCACGCAAGAGGAAATATAACTGGAGCGTCAAGGCAATCCGCAGAAAGACCACCGGAACTGGTAGGATGAGGTACTTGCGTCACGTCCCTCGCCGTTTCAAGACCGGCTTCAGAGAAGGTACTGAAGCTGCACCTAGGAAGAAGGGAGGTGCTGCTGCCACTGCATGA 408 0.5441 MGFSESPVMAQNQFNKEQSRIGLPHSSFAASHRVSASASMGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKTGFREGTEAAPRKKGGAAATA* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00222 135 ProSitePatterns Ribosomal protein L37e signature. 43 62 IPR018267 GO:0003735|GO:0005840|GO:0006412
Rops7g00222 135 PANTHER 60S RIBOSOMAL PROTEIN L37 40 133 - -
Rops7g00222 135 Hamap 50S ribosomal protein L37e [rpl37e]. 41 92 IPR001569 GO:0003735|GO:0005840|GO:0006412
Rops7g00222 135 Gene3D - 40 126 IPR011331 GO:0003735|GO:0005840|GO:0006412
Rops7g00222 135 Pfam Ribosomal protein L37e 42 92 IPR001569 GO:0003735|GO:0005840|GO:0006412
Rops7g00222 135 SUPERFAMILY Zn-binding ribosomal proteins 40 94 IPR011332 GO:0006412
Rops7g00222 135 FunFam Ribosomal protein L37 40 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00222 Rops-Chr7 3071925 3073024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00222 40 133 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 87.234 3.22e-57 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00222 K02922 - csv:101221537 192.971