Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00219 ATGGACTTTTGGGCAGAATTCCAGGCGGGCAGTGCAGGTAAAGAATTTGTAGCGGGAGGTTTTGGAGGCATAGCTGGTATAATCTCCAGTTATCCATTGGACACGCTCCGAATCTTGCAACAGCAATCCAACAATGGCTCTGCCATCAACATCCTTAGAAATGTGCTGGCCAAGGAAGGCCCAGCTGCTCTGTACCGTGGCATGGGTATGCCTTTGGCCTTTGTTACTTTTCAGAACGCTTTGGTTTTCCAAATTTACACAGTTTTCACAAGGGCATTCAACTCGTCCATTTCTTCTAATGGCCCTCCATCCCTTAAGGCTGTTGCTTTGGGAGGACTTGGTGCTGGTGCTCTCCAAAGTCTAATGCTCTCGCCTGTTGAGTTAATTAAAATTCGCCTTCAGCTGCAGAATAACACAAGCCAATTGACAGAAACAAAAAATGGTCCTGTCAGGATTGCTAAGAACATATGGAAAAATGAGGGCCTTCGTGGCATTTATCGAGGACTTGGCATTACTTTGCTCAGAGATGCACCTGCCCATAGCATCTACTTCTGGACATATGAATACATGAGGGAAAAACTTCACCCTGGTTGTAGAGAAAGTTCTCAAGTAAGCTTGAATACTATGTTTGTAGCAGGAGGATTAGCGGGGATGACGAGTTGGATTTTCACCTACCCTACAGATGTTATCAAGACAAGATTGCAGATTCATACACCTTCTTCTCAGAAATACAAAGGTATTTTGGATTGCGTACTAAAGATCATAAAAGAAGAAGGATATGTTAAACTGTGGCGGGGTTTGGGAACTGCTCTTGCTAGAGCGTTTGTGACGAATGGTGCTGTATTTTCTGCTTATGAGATCACCCTAAGATGTTTGTTTAACAACTGA 888 0.4381 MDFWAEFQAGSAGKEFVAGGFGGIAGIISSYPLDTLRILQQQSNNGSAINILRNVLAKEGPAALYRGMGMPLAFVTFQNALVFQIYTVFTRAFNSSISSNGPPSLKAVALGGLGAGALQSLMLSPVELIKIRLQLQNNTSQLTETKNGPVRIAKNIWKNEGLRGIYRGLGITLLRDAPAHSIYFWTYEYMREKLHPGCRESSQVSLNTMFVAGGLAGMTSWIFTYPTDVIKTRLQIHTPSSQKYKGILDCVLKIIKEEGYVKLWRGLGTALARAFVTNGAVFSAYEITLRCLFNN* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00219 295 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 11 292 - -
Rops7g00219 295 ProSiteProfiles Solute carrier (Solcar) repeat profile. 204 291 IPR018108 -
Rops7g00219 295 PRINTS Mitochondrial carrier protein signature 213 235 IPR002067 GO:0055085
Rops7g00219 295 PRINTS Mitochondrial carrier protein signature 166 184 IPR002067 GO:0055085
Rops7g00219 295 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085
Rops7g00219 295 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Rops7g00219 295 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Rops7g00219 295 SUPERFAMILY Mitochondrial carrier 13 286 IPR023395 -
Rops7g00219 295 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 193 IPR018108 -
Rops7g00219 295 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 92 IPR018108 -
Rops7g00219 295 Pfam Mitochondrial carrier protein 206 294 IPR018108 -
Rops7g00219 295 Pfam Mitochondrial carrier protein 109 194 IPR018108 -
Rops7g00219 295 Pfam Mitochondrial carrier protein 11 95 IPR018108 -
Rops7g00219 295 Gene3D Mitochondrial carrier domain 7 294 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00219 Rops-Chr7 3053122 3056212 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00219 1 295 Antiporters AT1G79900 64.865 2.29e-130 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00219 K15109 - gmx:100801221 438.728