Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00218 ATGCAGTGTGGTGTGGCTTTGAGGAAGGTGAAAATGGACTTTGGGGCAGAATTTCTTGCGAGCAGTGCGGGTAGAGAGTTTGTAGCAGGAGGCTTTGGAGGCACAGCTGGTGTAATCTCTAGTTACCCATTGGACACACTCCGAATATTGCAACAGCAATCCAACAAGGGCTCCTCTGCCCTTAACATCCTTAGAACAGTGGTGGCCAAGGAAGGACCAACTGCTCTGTACCGTGGCATGGGTATGCCTTTGGCCTCTGTTACTTTTCAGAATGCTATGGTTTTCCAAAGTTATGCAGTTTTCACAAGGGTATTTAGCTCGTCGGTTTCTTCTAATGGTCCTCCATCCCTCGCAGATGTTGCTTTGGGAGGGCTTGGTGCCGGTGCTCTCCAAAGTATATTGGTCTCCCCTGTGGAGTTGGTTAAAATTCGCCTTCAGCTGCAGAACAACACTAGCAAATTGACAAAAACCGAAAACGGTGCAGTCAGGATTGCTAAGAACATATGGAAAAAGGAGGGCCTTTGTGGCATCTATAGAGGACTTAGCATTACTGTTCTCAGAGATGCACCTGCCCATGGCATTTACTTCTGGACATATGAGTACATGAGGGAAAAACTTCGCCCTGGTTGCAGAAAAAGTGGTCAAGAAAGCTTGAATACTATGTTTATAGCAGGAGGATTAGCAGGGAGGCGAGTTGGATTTTCAACTACCCTACAGACGTTATAA 726 0.4669 MQCGVALRKVKMDFGAEFLASSAGREFVAGGFGGTAGVISSYPLDTLRILQQQSNKGSSALNILRTVVAKEGPTALYRGMGMPLASVTFQNAMVFQSYAVFTRVFSSSVSSNGPPSLADVALGGLGAGALQSILVSPVELVKIRLQLQNNTSKLTKTENGAVRIAKNIWKKEGLCGIYRGLSITVLRDAPAHGIYFWTYEYMREKLRPGCRKSGQESLNTMFIAGGLAGRRVGFSTTLQTL* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00218 241 ProSiteProfiles Solute carrier (Solcar) repeat profile. 21 104 IPR018108 -
Rops7g00218 241 Gene3D Mitochondrial carrier domain 19 238 IPR023395 -
Rops7g00218 241 ProSiteProfiles Solute carrier (Solcar) repeat profile. 115 205 IPR018108 -
Rops7g00218 241 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 21 229 - -
Rops7g00218 241 Pfam Mitochondrial carrier protein 22 107 IPR018108 -
Rops7g00218 241 Pfam Mitochondrial carrier protein 119 206 IPR018108 -
Rops7g00218 241 SUPERFAMILY Mitochondrial carrier 25 234 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00218 Rops-Chr7 3030767 3032420 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00218 12 229 Antiporters AT1G79900 66.514 6.07e-93 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00218 K15109 - gmx:100812034 296.204