Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00217 ATGGTTTTTCAAAGTTATGCAGTTTTCACAAGGGCATTTAGCTCGTCGGTTTCTTCTAATGGCCCTCCATCCCTCAAGGATGTTGCTTTGGGAGGGCTTGGTGCCGGTGCTCTCCAATGTCTATTGGTATCCCCTGTTGAGTTAGTTAAAATTCGCCTTCAGCTACAGAACAACACAAATCAATTGACAGAAACAAAAAACAGTCCTATCAAGATTGCTAAGAACATTTGGAAAAAGGAGGGCCTTTTTGGAATTTATAGAGGATTTGGCATTACTGTGCTGAGAGATGCACCTGCCCATGGCATCTACTTCTGCACATATGAATACACAAAGGAAAAACTTCGCCCTCATTGTAGAGAAAGTTCTCAAGAAAGCTTGGATTTTCAACTACCCTACAGACGTTATAAAGACAAGGTTGCAGGTTCAGACACCTTCTTCACTGAAATACAAAGGTATTTTGGATTGTGTCCTAAAGATCATAAAAGAAGAAGGATACCTTGTGCTATGGCGGGGTTTGGGAGCTGCACTTGTTAA 534 0.4157 MVFQSYAVFTRAFSSSVSSNGPPSLKDVALGGLGAGALQCLLVSPVELVKIRLQLQNNTNQLTETKNSPIKIAKNIWKKEGLFGIYRGFGITVLRDAPAHGIYFCTYEYTKEKLRPHCRESSQESLDFQLPYRRYKDKVAGSDTFFTEIQRYFGLCPKDHKRRRIPCAMAGFGSCTC* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00217 177 Gene3D Mitochondrial carrier domain 1 146 IPR023395 -
Rops7g00217 177 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 2 124 - -
Rops7g00217 177 Pfam Mitochondrial carrier protein 30 114 IPR018108 -
Rops7g00217 177 ProSiteProfiles Solute carrier (Solcar) repeat profile. 23 113 IPR018108 -
Rops7g00217 177 SUPERFAMILY Mitochondrial carrier 3 121 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00217 Rops-Chr7 3027734 3028267 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00217 1 130 Antiporters AT1G79900 57.692 1.25e-47 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00217 K15109 - gmx:100812034 171.785