Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00216 ATGACTGTATTAAGGTGGATGGATAGGAAAGTAGCTGGGGAGACTCAGAGTAATGTGGGACTTATTCCCTTTAAAAAACACCACACAAATCGGTGGTGGATTTGGCTCATAATTGGGGTGGGAGCAGCCCTTGCAATACCTGTGATCGTCTATTCAATCCGAGCCTTGTGGAGAAAATACAAAGCAGAAGTGAATAGAAAAAAGATGCAGAAGGAGCTATTACATGAGATTGGAGGTAATGCAATGCTTTCAATGGTATACGGCAAAGCCAAAACAAGTAAAAACAGGGAAAAGACGAGCAATGAGGTCCAAATATTCACTTTCGAAAGCATCGCTGCTGCCACAAACAATTTCTCAGTTGCTAATAAGCTAGGAGAGGGTGGTTTTGGTCCTGTTTTTAAGGGAACATTAAGTGATCAACAAGAGGTAGCAATGAAGCGACTTTCTAAAGGTTCAGGACAGGGCCTGATAGAGTTTAAGAATGAAGCTAAACTCATGGCCAAACTCCAGCACACTAATCTTGTTAAGCTTTTAGGGTTCTGTATCCAGAGAGATGAAAGAATATTAGTCTATGAGTACATGTCTAACAAGAGCTTAGACTTCTACTTATTTGATTCAACTAGAAAGAATTTGCTGGACTGGAAAAAACGCTTGAACATCATTGGAGGCATTGCTCAAGGACTTCTTTATCTTCACAAATATTCAAGACTAAAGGTGATACATCGGGACCTGAAAGCAAGCAATATATTACTTGATGAAGAGATGAATCCAAAAATATCTGACTTTGGCATGGCTCAAATATTTGGTCTAAGAGTATCAGAAGAAAACACAAATAGAGTTGTTGGTACTTATGGTTACATGGCTCCAGAGTATGCAATAAATGGTGTTGTTTCTATCAAAATAGATGTGTTTAGCTTTGGTGTCCTGCTATTAGAGATTCTAAGTGGCAAGAAGAATAATAGTCACTATCATTTGGAACACCCACTCAACCTCATAGGATATGCATGGCAGCTCTGGAATGAAGGTAAAGCTCTGGAGCTAGTAGACCCAGCATTAAATGAATTAAGTACTCAGAATGAAGTTATGAGATGTATTCATATTGGCCTCTTGTGTGTACAAGATCAAGCAAAAGATAGACCTACCATGTTAGATATAGTTTCTTTTCTATCAAATGATACAATCCAACTTCCCCAACCAAAGCAGCCAGCATTCTTCATCAATGTGGTTGTAGAAGAGTCAGAGCTTCCTTACTGCAGGCAAGAACATCATTCCTTAAATGATGTAACAATTTCTAGCATTGGTGGAAGATAA 1311 0.3883 MTVLRWMDRKVAGETQSNVGLIPFKKHHTNRWWIWLIIGVGAALAIPVIVYSIRALWRKYKAEVNRKKMQKELLHEIGGNAMLSMVYGKAKTSKNREKTSNEVQIFTFESIAAATNNFSVANKLGEGGFGPVFKGTLSDQQEVAMKRLSKGSGQGLIEFKNEAKLMAKLQHTNLVKLLGFCIQRDERILVYEYMSNKSLDFYLFDSTRKNLLDWKKRLNIIGGIAQGLLYLHKYSRLKVIHRDLKASNILLDEEMNPKISDFGMAQIFGLRVSEENTNRVVGTYGYMAPEYAINGVVSIKIDVFSFGVLLLEILSGKKNNSHYHLEHPLNLIGYAWQLWNEGKALELVDPALNELSTQNEVMRCIHIGLLCVQDQAKDRPTMLDIVSFLSNDTIQLPQPKQPAFFINVVVEESELPYCRQEHHSLNDVTISSIGGR* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00216 436 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 194 397 - -
Rops7g00216 436 ProSiteProfiles Protein kinase domain profile. 118 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00216 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Rops7g00216 436 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 30 431 - -
Rops7g00216 436 CDD STKc_IRAK 124 389 - -
Rops7g00216 436 Gene3D Transferase(Phosphotransferase) domain 1 194 400 - -
Rops7g00216 436 SMART serkin_6 118 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00216 436 Pfam Protein tyrosine and serine/threonine kinase 120 389 IPR001245 GO:0004672|GO:0006468
Rops7g00216 436 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 83 193 - -
Rops7g00216 436 SUPERFAMILY Protein kinase-like (PK-like) 100 411 IPR011009 -
Rops7g00216 436 Pfam Domain of unknown function (DUF3403) 391 436 IPR021820 GO:0004674
Rops7g00216 436 Gene3D Phosphorylase Kinase; domain 1 91 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00216 Rops-Chr7 3005363 3014886 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00216 87 414 Receptor kinase-like Gene Family AT4G23190 55.060 4.05e-132 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g00216 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00216 - - lang:109358482 701.049