Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00215 ATGCTTGATGAAATTGTGGATTATGTGAAGTTCCTAAAGCTCCAGGTTAAGTTACCCATTGGACACACTCCGCATCTTGAAACAGCTCAGCAATCCAACAACCGCTCTGCCGTCAACGTTCTTAGGAAAGTGTTGGTGAAGGAAGGACCAGCAGCTCTGTACCGTGGCATGGCTATGCCCTTGGCCTCTATTACTTTTCAGAACCCATCTCTCCCCTATGGTGTGTTTCCATCTACCCTTCCAAGAAGCCACACTACTTTGTTCTTCTTTACTGACAATTTCTCAGCTGCTAATAGGCTAGGAGAGGGTGGTTTTGGTCCTGTTTATAAGGGAACCTTAAGTGACCAGCAAGAGGTAGCAATAAAGCGACTTTCTAAAAGTTCAGAACAGGGCCATACAGAGTTTAAGAATGAAGCTAAACTCATGGCCAAACTCCAGCACACTAATCTTGTAAAGCTTTTAGGGTTCTGTATCCAGAGAGATGAAAGAATATTAGTCTATGAGTACATGTCTAACAAGAGTTTAGACTTCTACCTATTTGATTCAACTAGAAAAAATTTGCTGGACTGGAAAAAACGCTTAAACATCGTTGGAGGCATCGCTCAAGGACTTCTTTATCTTCACAAGTATTCAAGATTAAAGGTGATACATCGAGACCTGAAAGCAAGCAATATATTACTTGATGAAGAGATGAATCCAAAAATATCTGACTTTGGCATGGCTCGAATATTTGGCCTAAGAGTATCAGAAGAAAACACAAACAGAGTTGTTGGTACATATGGTTACATGGCTCCAGAGTATGCAATAAATGGTGTTGTGTCTATGAAAATAGATGTGTTTAGCTTTGGTGTGCTGCTATTAGAGATTCTTAGTGGCAAGAAGAATAATAGTCACTATCGTTTGGATCGCCCACTCAACCTCATAGGATATGCATGGGAGCTCTGGAATAAAGGCAAAGATCTGGAGCTAGTAGACCCAGCATTAAATGAATTAAGTTATCAGAAAGAAGTTTTGAGATGCATTCATATTGGCCTCTTGTGTGTACAAGATCAAGCTAAAGACAGACCTACCATGTTAGATATTGTTTCTTTTCTATCAACTGATACAATCCAACTTACCCAACCAAAGCAGCCAGCATTCTTCATCAATGCGGTTGTAGAAGAGTCAGATCTTCCTTGCAGAAACACCATTCCTTAA 1197 0.4035 MLDEIVDYVKFLKLQVKLPIGHTPHLETAQQSNNRSAVNVLRKVLVKEGPAALYRGMAMPLASITFQNPSLPYGVFPSTLPRSHTTLFFFTDNFSAANRLGEGGFGPVYKGTLSDQQEVAIKRLSKSSEQGHTEFKNEAKLMAKLQHTNLVKLLGFCIQRDERILVYEYMSNKSLDFYLFDSTRKNLLDWKKRLNIVGGIAQGLLYLHKYSRLKVIHRDLKASNILLDEEMNPKISDFGMARIFGLRVSEENTNRVVGTYGYMAPEYAINGVVSMKIDVFSFGVLLLEILSGKKNNSHYRLDRPLNLIGYAWELWNKGKDLELVDPALNELSYQKEVLRCIHIGLLCVQDQAKDRPTMLDIVSFLSTDTIQLTQPKQPAFFINAVVEESDLPCRNTIP* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00215 398 Gene3D Phosphorylase Kinase; domain 1 78 169 - -
Rops7g00215 398 ProSiteProfiles Protein kinase domain profile. 94 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00215 398 SMART serkin_6 94 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00215 398 FunFam Os08g0179000 protein 83 169 - -
Rops7g00215 398 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 170 373 - -
Rops7g00215 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Rops7g00215 398 Gene3D Transferase(Phosphotransferase) domain 1 170 379 - -
Rops7g00215 398 CDD STKc_IRAK 100 365 - -
Rops7g00215 398 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 91 384 - -
Rops7g00215 398 Pfam Protein tyrosine and serine/threonine kinase 97 365 IPR001245 GO:0004672|GO:0006468
Rops7g00215 398 SUPERFAMILY Protein kinase-like (PK-like) 79 382 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00215 Rops-Chr7 2988366 3002439 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00215 91 380 Receptor kinase-like Gene Family AT4G23230 60.690 7.78e-128 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g00215 PK_Tyr_Ser-Thr 6.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00215 - - lang:109358482 521.161