Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00213 ATGATACTGAACCTAGTACTTGTTGTCCACTTATGTCATGTAAAATGTAACCAGAATCAGAGAAGTCCTTTATCAAGGTGGCCTGCTTGTCCAGTAGATGCTGCTTTTCCACTTATAACCAATTGCTCTTTGTTGTTTGGGTCCACCCCAAGAGTGAAGGAACCCACCAAAGCAGACAATTTCTCAGCTGCTAACAAGCTAGGAGAGGGTGGTTTTGGTCCTGTTTATAAGGGAACCTCAAGTGACCAGCAAGAGGTAGCAATAAAGCGACTTTCTAAAAGTTCAGGACAGGGCCTTAGAGAGTTTAAGAATGAAGCTAAACTCATGGCCAAGCTCCAGCACACTAATCTTGTAAAGCTTCTAGGGTTCTGTATCCAGAGAGATGAAAGAATATTAGTCTATGAGTACATGTCTAACAAGAGCTTAGACTTCTACTTATTTGATTCAACTAGAAAGAATTTGCTAGACTGGAAAAAACGCTTGAACATCATTGGAGGCATTGCTCAAGGACTTGTTTATCTTCACAAGTATTCAAGATTAACGGTGATACATCGAGACCTGAAAGCAAGCAATATATTACTTGATGAAGCGATGAATCCAAAAATATCTGACTTTGGCATGGCTCGAATATTTGGTCCAAGAGTATCAGAAGAAAACACAAACAGAGTTGTTGGTACATATGGTTACATGGCTCCAGAGTATGCAATAAATGGTGTTGTTTCTATCAAAATAGATGTGTTTAGCTTTGGTGTCCTGCTATTAGAGATTCTAAGTGGCAAGAAGAATAATAGTCACTATCACTTGGATCGCCCACTCAACCTCATAGGATATGCATGGCAGCTCTGGAATGAAGGTAAAGCTCTCGTGCTAGTAGACCCAGCATCAAATAAATTAAGTACTCAGAATGAAGTGATGAGATGCATTCATATCGGCCTGTTGTGTGTACAAGATCAAGCAAAAGATAGACCTGCCATGTTAGACATTGTTTCTTTTCTATCAAATGATACAATCCAACTTCCCCAACCAAAGCAGCCAGCATTCTTCATCAATGTGGTTGTAGAAGAGTCAGAGCTTCCTTACAGCAAGCAAGAACATCATTCCTTGAATGATGTAACAATTTCTGATATGAGTGGAAGATAA 1140 0.3965 MILNLVLVVHLCHVKCNQNQRSPLSRWPACPVDAAFPLITNCSLLFGSTPRVKEPTKADNFSAANKLGEGGFGPVYKGTSSDQQEVAIKRLSKSSGQGLREFKNEAKLMAKLQHTNLVKLLGFCIQRDERILVYEYMSNKSLDFYLFDSTRKNLLDWKKRLNIIGGIAQGLVYLHKYSRLTVIHRDLKASNILLDEAMNPKISDFGMARIFGPRVSEENTNRVVGTYGYMAPEYAINGVVSIKIDVFSFGVLLLEILSGKKNNSHYHLDRPLNLIGYAWQLWNEGKALVLVDPASNKLSTQNEVMRCIHIGLLCVQDQAKDRPAMLDIVSFLSNDTIQLPQPKQPAFFINVVVEESELPYSKQEHHSLNDVTISDMSGR* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00213 379 CDD STKc_IRAK 67 332 - -
Rops7g00213 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Rops7g00213 379 SMART serkin_6 61 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00213 379 Pfam Protein tyrosine and serine/threonine kinase 64 332 IPR001245 GO:0004672|GO:0006468
Rops7g00213 379 ProSiteProfiles Protein kinase domain profile. 61 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00213 379 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 137 340 - -
Rops7g00213 379 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 59 379 - -
Rops7g00213 379 Pfam Domain of unknown function (DUF3403) 334 379 IPR021820 GO:0004674
Rops7g00213 379 Gene3D Phosphorylase Kinase; domain 1 51 136 - -
Rops7g00213 379 SUPERFAMILY Protein kinase-like (PK-like) 55 359 IPR011009 -
Rops7g00213 379 Gene3D Transferase(Phosphotransferase) domain 1 137 344 - -
Rops7g00213 379 FunFam Os08g0179000 protein 52 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00213 Rops-Chr7 2948324 2959053 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00213 58 347 Receptor kinase-like Gene Family AT4G23230 61.724 3.75e-127 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g00213 PK_Tyr_Ser-Thr 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00213 - - lang:109358482 555.444