Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00212 ATGTACGGTGGCTCTACGGTGGGTTGTTTTAGTTCCTATTGCGCCGCTCTCTCCTTCACTAGTCTCTCTCTCTCTCATCTTCTCTTCTGGTACTCTCTCTCTGGCATCTTCGCCTGCGCGCTGGACTCCATCCACCCCGTTCAGAACAATTTCTCAGCTGCTAATAAGCTAGGAGAGGGTGGTTTTGGTCCTGTTTATAAGGGAACCTTAAGTGACCAGCAAGAGGTAGCAATAAAGCGACTTTCTAAAAGTTCAGGACAGGGCCTTACAGAGTTTAAGAATGAAGCTAAACTCGTGGCCAAACTCCAGCACACTAATCTTGTAAAGCTTTTAGGGTTCTGTATCCAGAGAGATGAAAGAATATTAGTCTATGAGTACATGTCTAACAAGAGTTTAGACTTCTACCTATTTGATTCAACTAGAAATAATTTGCTGGACTGGAAAAAACGCTTAAACATCATTGGAGGCATCGCTCAAGGACTTCTTTATCTTCACAAGTATTCAAGATTAAAGGTGATACATCGAGACCTGAAAGCAAGCAATATATTACTTGATGAAGAGATGAATCCAAAAATATCTGACTTTGGCATGGCTCGAATATTTGGCCTAAGAGTATCAGAAGAAAACACAAACAGAGTCGTTGGTACATGTGGTTACATGCCTCCAGAGTATGCAATAAATGGTGTTGTGTCTACGAAAATAGATGTGTTTAGCTTTGGTGTGCTGCTATTAGAGATTCTTAGTGGAAAGAAGAATAATAGTCACTATCATTTGGATCGCCCACTCAACCTCATAGGATATGCATGGCAGCTCTGGAATGAAGGCAAAGATCTGGAGCTAGTAGACCCAGCATTAAATGAATTAAGTTCTCAGAAAGAAGTTTTGAGATGCATTCATATTGGCCTCTTGTGTGTACAAGATCAAGCTAAAGACAGACCTACCATGTTAGATATCGTTTCTTTTCTATCAACTGATACAATCCAACTTACCCATCCAAAGCAGCCAGCATTCTTCATCAATGCGGTTGTAGAAGAGTCAGATCTTCCTTGCAGAAACACCATTCCTTAA 1068 0.4092 MYGGSTVGCFSSYCAALSFTSLSLSHLLFWYSLSGIFACALDSIHPVQNNFSAANKLGEGGFGPVYKGTLSDQQEVAIKRLSKSSGQGLTEFKNEAKLVAKLQHTNLVKLLGFCIQRDERILVYEYMSNKSLDFYLFDSTRNNLLDWKKRLNIIGGIAQGLLYLHKYSRLKVIHRDLKASNILLDEEMNPKISDFGMARIFGLRVSEENTNRVVGTCGYMPPEYAINGVVSTKIDVFSFGVLLLEILSGKKNNSHYHLDRPLNLIGYAWQLWNEGKDLELVDPALNELSSQKEVLRCIHIGLLCVQDQAKDRPTMLDIVSFLSTDTIQLTHPKQPAFFINAVVEESDLPCRNTIP* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00212 355 Gene3D Transferase(Phosphotransferase) domain 1 127 335 - -
Rops7g00212 355 CDD STKc_IRAK 57 322 - -
Rops7g00212 355 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 32 126 - -
Rops7g00212 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Rops7g00212 355 SMART serkin_6 51 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00212 355 Pfam Protein tyrosine and serine/threonine kinase 54 322 IPR001245 GO:0004672|GO:0006468
Rops7g00212 355 SUPERFAMILY Protein kinase-like (PK-like) 42 339 IPR011009 -
Rops7g00212 355 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 127 330 - -
Rops7g00212 355 ProSiteProfiles Protein kinase domain profile. 51 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00212 355 Gene3D Phosphorylase Kinase; domain 1 28 126 - -
Rops7g00212 355 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 41 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00212 Rops-Chr7 2897836 2904889 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00212 44 341 Receptor kinase-like Gene Family AT4G23230 60.403 1.26e-128 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g00212 PK_Tyr_Ser-Thr 2.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00212 - - gmx:100794508 523.857