Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00210 ATGTATTCAAACAAGTGGTGGATATGGCTTATCATTGGGGTGGGAGCAGCCCTTGCAATATGTCTCATCTTTTACTTAAGCCTTAACTTAGGGAGGAAAGACAAAGCAGAAGTGGATGGAAAAATGAACCAAAAAATTGGAGGCAATATAGTGCTTCCTGACAAAGCTAAAAGTATTGAAATAGAGGGAAGGACTAGTAACGAGGTCAAAATGTTCAGTTTTGAAGGCAGTATTGCTGCCACAAACAATTTTTCATCTACTAACAAGCTGGGAGAGGGTGACTTTGGTCCTGTTTATAAGGGAACATTGGTAAATGGGCAAGAAATAGCAATAAAGCGACTTTCTACAACTTCAAGAGAAGGGTTGATAGAGTTCAAGAATGCAGCTAAGCTCATGGCCAAACTCCAGCACAGTAATCTTGTAAGGCTTTTAGGGTTCTGCTTCCAGAAAGATGAAAGAATACTAGTATATGAGTATATCTCCAAAAGAAGTTTGGACTTCTATTTGTTTGATGCAAATGCAAAGAATGTGCTGGATTGGAGAAAACGAACTAACATCATTGAAGGCATTGCTCAAGGGCTTTTTTATCTTCACAATAATTCAAGACTTCCAGTGATACATCAGAACCTGAAGGCAAGCAATATATTGCTTGATAAAGAGATGAATCCTAAAATATTTGATTTTGGCATGGCACAAATGTTTGGTTTAAAAAGTCTTGAAGATACAAATAGAATTGTTGGCAAATATGGGTGCATGTCATCTGAACATGCAATCAATGGTATTTCATCTGTTAAAATAGATGTTTTCAGTTTTGGTGTTCTGATATTGGAGATTCTCAGTGGCAAGACGAGTAGTAGTCATTATCATTCAGCTGAACCACCTAATCTAATAGGATATGTATGGCAGCTATGGAATTCAGGTCGAGCTCTAGAGCTAATACATTCAGCACTAAATAAATCAAGCACTCCAAATGAAGTGATGAGATATATTCATATTGGCCTCTTGTGCGTACAAGGTCATGCAGCAGACATACCTACCATGTCAGATGTTGTTTCTTTTCTCTCAAATGATACAATTGAACTTCCTCAGCCAAAACAGCCAGCATTCTTCACCAATGTGGTTGGGGAAGATTCAGCTGCCTAA 1143 0.3806 MYSNKWWIWLIIGVGAALAICLIFYLSLNLGRKDKAEVDGKMNQKIGGNIVLPDKAKSIEIEGRTSNEVKMFSFEGSIAATNNFSSTNKLGEGDFGPVYKGTLVNGQEIAIKRLSTTSREGLIEFKNAAKLMAKLQHSNLVRLLGFCFQKDERILVYEYISKRSLDFYLFDANAKNVLDWRKRTNIIEGIAQGLFYLHNNSRLPVIHQNLKASNILLDKEMNPKIFDFGMAQMFGLKSLEDTNRIVGKYGCMSSEHAINGISSVKIDVFSFGVLILEILSGKTSSSHYHSAEPPNLIGYVWQLWNSGRALELIHSALNKSSTPNEVMRYIHIGLLCVQGHAADIPTMSDVVSFLSNDTIELPQPKQPAFFTNVVGEDSAA* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00210 380 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
Rops7g00210 380 SUPERFAMILY Protein kinase-like (PK-like) 68 374 IPR011009 -
Rops7g00210 380 ProSiteProfiles Protein kinase domain profile. 84 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00210 380 Pfam Protein tyrosine and serine/threonine kinase 87 301 IPR001245 GO:0004672|GO:0006468
Rops7g00210 380 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 160 362 - -
Rops7g00210 380 FunFam Os08g0179000 protein 54 159 - -
Rops7g00210 380 Gene3D Transferase(Phosphotransferase) domain 1 160 365 - -
Rops7g00210 380 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 8 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00210 Rops-Chr7 2861501 2863212 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00210 52 370 Receptor kinase-like Gene Family AT4G05200 50.625 9.98e-111 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g00210 PK_Tyr_Ser-Thr 1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00210 - - lang:109358482 490.73