Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00200 ATGAGTGTGGTCGGATTTGATTTTGGTAATGAGAGCTGCATTGTTGCTGTTGCGAGGCAGAGGGGCATTGATGTTGTGCTCAATGATGAGTCCAAGCGTGAAACACCTGCAATTGTATGCTTTGGTGATAAACAAAGGTTTATCGGGACAGCTGGGGCTGCATCTACTATGATGAACCCAAAGAATTCGATCTCACAGATAAAGCGGTTAATTGGTAAGAAATTTGCTGATCCGGAAGTGCAGCAGGATTTGAAGTCATTTCCATTTGCTGTCACCGAAGGACCTGATGGATATCCATTAATTCATGCACGATACCTGGGTGAAGTTAAAACATTTACACCTACCCAAGTCTTTGCAATGATGTTATCAAATCTTAAAGAAATAGCACAGAAAAATCTGAATGCAGCTGTTGTTGATTGCTGCATTGGAATTCCAGTTTATTTTACTGATCTTCAGAGGAGAGCGGTCTTGGATGCAGCCACTATTGCGGGCTTGCATCCACTTCGCCTGTTTCATGAAACAACGGCAACTGCCTTGGCTTATGGAATTTATAAGACTGATCTTCCTGAAAATGATCAGCTGAATGTTGCCTTTGTTGACATTGGACATGCTAGCATGCAAGTGTGTATTGCTGGATTTAAGAAGGGGCAGCTGAAAGTGTTGTCCCATTCATATGATAGGTCCCTGGGTGGTAGGGATTGTGATGAGGTTCTGTTTCATCATTTTGCTGCAAAATTCAAGGAGGAGTACAAGATTGATGTTTTCCAGAACGCCAGAGCTTGTCTAAGGCTGAGGGCTGCTTGTGAGAAATTGAAGAAAGTGCTTAGTGCAAACCCAGAGGCACCTCTGAACATTGAGTGCTTGATGGATGAGAAGGATGTCAGGGGCTATATCAAACGTGAGGAGTTTGAGCAACTAAGCCTTCCAATTTTGGAACGTGTGAAGGGACCTTTGGAGAAGGCACTTGCAGAAGCAGGTCTTACAGTTGAGAATGTCCACATGGTTGAGGTGGTTGGTTCTGGTTCTCGTGTACCAGCTATAAACAAAATACTGACAGAGTTTTTCAAAAAGGAGCCTAGGCGCACAATGAATGCTAGTGAGTGTGTTGCCAGGGGTTGTGCATTGCAATGTGCAATTCTCAGTCCCACTTTTAAAGTACGGGAGTTTCAGGTCAGTGAAAGCTTTCCTTTCTCAATTTCTCTGTCATGGAAAGGTTCTGGTCCAGATGCACAGGATACTGGACCAGATAATAAGCTAAGTACCCTTGTTTTCCCCAAGGGAAATCCCATACCAAGTGTCAAGGCACTGACATTCTACAGGCCAGGAACCTTTTCCGTTGATGTACAATATGATAATGTGACTGATTTGCAAACACCTGCAAAGATCAGCACATATACTATTGGCCCTTTCCAATCTACAAAAGGTGAAAAGGCAAAAGTTAAAGTGAAAGTTCGTTTGAATCTGCACGGAATTGTATCTATTGAGTCAGCAACTCTCCTGGAAGAGGAAGAAATTCAGGTACCAGTTGCCAAAGAATCAGCAGGAGAAAACACCAAGATGGAAACTGATGAAGCTCCTGCTGATGCTGCTGCACCTCCTGCCTCCAATGACAATGATGTCAATATGCAAGATGCTAAGGCAACTGCTGATACCCCTGGGGCCGAAAATGGCATCCCTGAGACAGGAGATAAGCCTGTGCAAATGGATACTGATACCAAGGTTGAGGCTCCAAAGAAAAAAGTGAAGAAAACAAACATTCCTGTGGCAGAGGTAGTTTATGGAGCAATGGCACCTGTGGATGTCCAGAAAGCTGTAGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGAGTGATGGAGGAAACAAAAGACAAGAAAAATGCAGTTGAGGCTTATGTTTATGACATAAGAAACAAGCTTAGTGACAAATACCAAGAGTTTGTCACCGCTTCAGAGAGGGAAGAGTTTACTGCTAAACTCCAGGATGTGGAAGACTGGCTATATGAGGATGGTGAAGATGAAACCAAAGGCGTGTACATTGCCAAGCTAGAAGAGCTCAAAAAGCAAGGTGATCCAATTGAAGAGCGTTACAAGGAATTCATGGATAGGGGTACAGTAATTGATCAACTCATCTATTGTATAAATAGTTACAGAGAAGCAGCAATGTCAAATGATCCCAAATTTGATCACATTGACATCAACGAGAAACAGAAGATCTTAAATGAATGTGTAGAAGCTGAGAACTGGCTTAGGGAGAAGAAGCAGCAACAGGATTCGCTACCAAAATATGCCAACCCTGTACTCTTGTCAGCTGAAATAAGAAAGAAAGCTGAGGCTGTTGATAGGTTCTGTAAGCCAATTATGACAAAACCAAAGCCGGCCAAGCCGGCTACTCCTGAAGCACCAGCAACCCCGCCTCCTCAGGGTGGTGAGGAGCAGCAGCAGCAGCAACAACCTCAGGAGGATGCAAATGTCAGCCCTAATGAGAATGCCGGGGATGACAGTAATCAGGCCCCACCAGCCTCCACTGAACCAATGGAGACTGACAAATCAGAGAACACAGGCTCTGCCTAA 2571 0.4407 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAASTMMNPKNSISQIKRLIGKKFADPEVQQDLKSFPFAVTEGPDGYPLIHARYLGEVKTFTPTQVFAMMLSNLKEIAQKNLNAAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASMQVCIAGFKKGQLKVLSHSYDRSLGGRDCDEVLFHHFAAKFKEEYKIDVFQNARACLRLRAACEKLKKVLSANPEAPLNIECLMDEKDVRGYIKREEFEQLSLPILERVKGPLEKALAEAGLTVENVHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVARGCALQCAILSPTFKVREFQVSESFPFSISLSWKGSGPDAQDTGPDNKLSTLVFPKGNPIPSVKALTFYRPGTFSVDVQYDNVTDLQTPAKISTYTIGPFQSTKGEKAKVKVKVRLNLHGIVSIESATLLEEEEIQVPVAKESAGENTKMETDEAPADAAAPPASNDNDVNMQDAKATADTPGAENGIPETGDKPVQMDTDTKVEAPKKKVKKTNIPVAEVVYGAMAPVDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDIRNKLSDKYQEFVTASEREEFTAKLQDVEDWLYEDGEDETKGVYIAKLEELKKQGDPIEERYKEFMDRGTVIDQLIYCINSYREAAMSNDPKFDHIDINEKQKILNECVEAENWLREKKQQQDSLPKYANPVLLSAEIRKKAEAVDRFCKPIMTKPKPAKPATPEAPATPPPQGGEEQQQQQQPQEDANVSPNENAGDDSNQAPPASTEPMETDKSENTGSA* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00200 856 Gene3D Actin; Chain A, domain 4 230 313 - -
Rops7g00200 856 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Rops7g00200 856 Gene3D - 598 705 IPR029048 -
Rops7g00200 856 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 711 795 IPR029048 -
Rops7g00200 856 PRINTS 70kDa heat shock protein signature 2 15 - -
Rops7g00200 856 PRINTS 70kDa heat shock protein signature 332 348 - -
Rops7g00200 856 PRINTS 70kDa heat shock protein signature 30 42 - -
Rops7g00200 856 PRINTS 70kDa heat shock protein signature 363 383 - -
Rops7g00200 856 PRINTS 70kDa heat shock protein signature 140 160 - -
Rops7g00200 856 FunFam Heat shock 70 kDa protein 4 38 113 - -
Rops7g00200 856 MobiDBLite consensus disorder prediction 807 856 - -
Rops7g00200 856 FunFam Heat shock 70 kDa protein 4 110 203 - -
Rops7g00200 856 MobiDBLite consensus disorder prediction 791 805 - -
Rops7g00200 856 Gene3D - 706 790 IPR029048 -
Rops7g00200 856 CDD HSPA4_like_NDB 2 381 - -
Rops7g00200 856 MobiDBLite consensus disorder prediction 511 568 - -
Rops7g00200 856 Pfam Hsp70 protein 3 697 IPR013126 GO:0005524|GO:0140662
Rops7g00200 856 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 598 696 IPR029048 -
Rops7g00200 856 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 629 IPR029047 -
Rops7g00200 856 FunFam Heat shock 70 kDa protein 4 596 706 - -
Rops7g00200 856 FunFam Heat shock 70 kDa protein 14 387 594 - -
Rops7g00200 856 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 594 IPR029047 -
Rops7g00200 856 MobiDBLite consensus disorder prediction 787 856 - -
Rops7g00200 856 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Rops7g00200 856 Gene3D - 5 374 - -
Rops7g00200 856 FunFam Heat shock 70 kDa protein 4 1 83 - -
Rops7g00200 856 Gene3D - 186 360 - -
Rops7g00200 856 Gene3D - 38 113 - -
Rops7g00200 856 PANTHER HSC70CB, ISOFORM G-RELATED 1 847 - -
Rops7g00200 856 FunFam Heat shock 70 kDa protein 4 230 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00200 Rops-Chr7 2788674 2793875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00200 4 438 Calmodulin-binding Proteins AT1G16030 34.932 2.10e-86 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00200 K09489 - gmx:100778196 1465.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00200 7 2788674 2793875 Rops7g00200 7 2788674 2793875 ECH
Rops7g00200 7 2788674 2793875 Rops4g02169 4 48137053 48148257 PCT