Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00198 ATGGATAACATTGAGGATGATGCAAGGTATCCCCCTAACCCATATGCTATTACTCACCACCAAAGTTATGGTTATCTGAATCATCAGAAATTTCCTTTGAGGAATTCTCCATATTCTCAGCCAGTTGCAAGTGAATATGCCCAACATAATAATAATGATGAGGATGAAGAAGACGGAGAGCAGTTAGGAGGGGAAGATGATGATGATGATGATCAAATTCAACTTTCCCAAAAGGATGCTGATGACAATGATGATGAAGAAGATGACATGGATAGGGATGGTGATGAAAATGATGGTAACAATGATGATGATGATGATGATGACCATGACGACAACAATAAGCAGAAAAGTTATGTCATAAAGACTGAAGATGATTTAGAGTGGCACCCAAAAAAGAAAAAGTTGAAGAGTTTGATTTCAGCCTATGAATTTGCACCTCGGGTGCCAGTACCATCAGCTGCGGCTCCCTCGGCTCCTAAACCATCTTTTGGGGGTAGGAATTCCCTTACTGACTGGACTGAGCGTGAGACATTTGTTCTTCTTGATGCATGGGGTGATCGGTTTCTTCAACATGGAAGGAAGAGTCTTCGATCCGAGGAATGGCAAGAAGTTGCAGCGAAGGTATCAGAAGTTTCAAAAATTGAAAGGACAGATACTCAGTGTAGAAATCGTCTAGATACATTGAAGAAAAAATACAAGAAGGAGAAGAATAAATTCCCAGAAATGGGTGGTGAAACTAGCAAATGGGTTTATTTTAAAAGGATGGATAAGCTAATGTCTTCTCCACCACCACAAGCAGGTCTCTCTTGTGGTTTGGACTCAGGAGAGTATGTTTTTATGAACCCTGGAGTTTATTTGAACCGTGCAAATGGGTTGGATGAAATGAGGGATAGTCCTGAGAATACAGAATCTACTGGTGAAGAAGGTTCAGATGGATCTCAAGCAAAGAAAGGAAGGAAAGGAAGGGGCAATGATGAAGCTTCTTCCTTCGGAGTACTTGCTGATTCCATTCAAAAATTCAGCAAGATATATGAGAAGATTGAAAATAGTAAAAGGCAGCAGATGATGGAACTGGAAAAGATGAGGATGGATTTCCTTAAGGAATTGGATACACAAAAGAGGCAGATTTTAGAAAGATTGCAGAGTGAAATTTCAAAATTAGACCAGCAAGATGATGAGAATGATGATTCTGCCGAGAATGGTATGTGA 1209 0.4003 MDNIEDDARYPPNPYAITHHQSYGYLNHQKFPLRNSPYSQPVASEYAQHNNNDEDEEDGEQLGGEDDDDDDQIQLSQKDADDNDDEEDDMDRDGDENDGNNDDDDDDDHDDNNKQKSYVIKTEDDLEWHPKKKKLKSLISAYEFAPRVPVPSAAAPSAPKPSFGGRNSLTDWTERETFVLLDAWGDRFLQHGRKSLRSEEWQEVAAKVSEVSKIERTDTQCRNRLDTLKKKYKKEKNKFPEMGGETSKWVYFKRMDKLMSSPPPQAGLSCGLDSGEYVFMNPGVYLNRANGLDEMRDSPENTESTGEEGSDGSQAKKGRKGRGNDEASSFGVLADSIQKFSKIYEKIENSKRQQMMELEKMRMDFLKELDTQKRQILERLQSEISKLDQQDDENDDSAENGM* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00198 402 MobiDBLite consensus disorder prediction 20 48 - -
Rops7g00198 402 Gene3D - 172 234 - -
Rops7g00198 402 FunFam trihelix transcription factor ASIL2 172 234 - -
Rops7g00198 402 MobiDBLite consensus disorder prediction 382 402 - -
Rops7g00198 402 MobiDBLite consensus disorder prediction 1 125 - -
Rops7g00198 402 Pfam Myb/SANT-like DNA-binding domain 171 258 IPR044822 -
Rops7g00198 402 MobiDBLite consensus disorder prediction 51 109 - -
Rops7g00198 402 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 160 393 IPR044823 -
Rops7g00198 402 MobiDBLite consensus disorder prediction 293 330 - -
Rops7g00198 402 MobiDBLite consensus disorder prediction 310 324 - -
Rops7g00198 402 MobiDBLite consensus disorder prediction 110 125 - -
Rops7g00198 402 ProSiteProfiles Myb-like domain profile. 172 229 IPR001005 -
Rops7g00198 402 Coils Coil 344 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00198 Rops-Chr7 2780459 2782332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00198 333 390 Trihelix Transcription Factor Family AT3G14180 50.000 6.12e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Rops7g00198 Myb_DNA-bind_4 5.4e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00198 - - tcc:18595893 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00198 7 2780459 2782332 Rops7g00198 7 2780459 2782332 ECH