Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00195 ATGAAAATCCAAACCGAGACACCAATATTTGAAATCCACCAAGTTCGTTTGCCACCAGAGAGAACCACTCTTCAAAAACTCAAACAAAGACTCTCTGAAATCTTCTTCCCTGATGATCCACTCTCACGTTTCAAGAACAAACCTTGGTTCATCAAGTTGTTTCTTGCCCTTCAATACTTGTTCCCCATTTTCCAATGGGGTCCTCACTATAACCTTAACCTTCTTCGCTCTGACATTATCTCTGGTCTCACCATTGCTAGCCTCGCCATTCCTCAGGGAATCAGTTATGCCAAACTTGCAAACTTGCCACCTATTCTTGGGTTATATTCAAGTTTTGTGCCACCATTGATATATTCACTGCTTGGAAGTTCTAGACATCTTGGTGTTGGACCTGTTTCAATTGCATCTTTGGTTATGGGATCAATGTTGAGTGAAAAGGTTTCTTATACTCATGAACCAGTTCTTTATCTGCAATTGGCTTTCACCGCCTCTTTCTTTGCCGGTTTATTCCAAGCTTCTCTGGGTTTTTTAAGGCTAGGCTTTATTATCGATTTTCTATCGAAGGCAACATTGGTGGGTTTCATGGCTGGTGCTGCGATTATTGTGTCACTTCAGCAACTGAAAGGGTTACTTGGAATAGTGCACTTTACTAACAGCATGCAAATGCTTTCTGTATTGGACTCTGTTTTCAAGCAAAGACACGAGTGGTCATGGCAAACCATTGTTCTAGGATTCTGCTTCCTGGCCTTCCTGCTGATAACAAGGCAAATTAGCTTGAAGAAACCAAAACTATTCTGGGTTTCGGCAGCTGCACCTTTGACATCAGTGATTCTCTCAACCCTTATAGTTTTTCTTCTGAGAAATAAGACTCATGACATTGCAATTATTGGGCACTTACCAAAGGGCCTTAATCCACCATCAACAAACATGCTAACCTTCAATGGTCCTCACTTGGGTCTTGCTATCAAAACCGGCATTGTCACGGGGATCTTATCTCTTACAGAAGGAATTGCAGTAGGTAGAACATTTGCAACACTTAAGAACTACCAGGTGGATGGAAACAAAGAAATGATGGCTATTGGTATTATGAACATAGCTGGTTCTTGTTCTTCATGCTATGTCACAACAGGATCCTTTTCTCGATCAGCTGTTAACTATAATGCTGGAGCACAGACGACAGTTTCAAATATAATTATGGCTGCAGCTGTTCTAGTGACCCTTCTATTTCTCATGCCTTTGTTCTACTATACACCAAGTGTGGTCTTAGCAGCCATTATCATTGCCGCTGTGATTGGACTAATAGATTATCAGTCTGCATATAAATTGTGGAAGGTTGACAAACTTGATTTCTTGGCCTGTTTGTGCTCCTTTATCGGGGTTCTGTTCATTTCAGTGCCTTTGGGCCTTGGTATAGCGGTTGCCATATCAGTCTTCAAGATCCTGCTTCATGTCTCTCGACCAAACACTTTGGTTTTGGGGAATATACCAGGAACACAAATATTTCACAACATAAACCAATACACAGAAGCTTCAAGAGTTCCTTCATTTCTCATTTTGGCTGTTGAGTCTCCAATCTATTTTGCTAATTCAACTTACATTCAAGAAAGGATAATGAGATGGATTCGAGAAGAGGAAGAGCATATAAAAGCAAATAATGGAAATCCATTGAAGTGCATGATACTAGACATGACAGCTGTCACAGCCATAGACACAAGTGGTCTTGAAACTTTAAATGAACTTAGAAAGATGCTGGAGAATAGATCATATCAGCTTGTGTTGGCAAATCCCGTTGGCACTGTGATGGAAAAGTTACACACGTCAGCAATTTTGGATTCCTTTGGATCAAAAGGAGTCTATCTCACAGTGGGAGAAGCTGTGGCTGACATTTCTTCATCTGATAAAGCTTAG 1908 0.4078 MKIQTETPIFEIHQVRLPPERTTLQKLKQRLSEIFFPDDPLSRFKNKPWFIKLFLALQYLFPIFQWGPHYNLNLLRSDIISGLTIASLAIPQGISYAKLANLPPILGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSEKVSYTHEPVLYLQLAFTASFFAGLFQASLGFLRLGFIIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTNSMQMLSVLDSVFKQRHEWSWQTIVLGFCFLAFLLITRQISLKKPKLFWVSAAAPLTSVILSTLIVFLLRNKTHDIAIIGHLPKGLNPPSTNMLTFNGPHLGLAIKTGIVTGILSLTEGIAVGRTFATLKNYQVDGNKEMMAIGIMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTTVSNIIMAAAVLVTLLFLMPLFYYTPSVVLAAIIIAAVIGLIDYQSAYKLWKVDKLDFLACLCSFIGVLFISVPLGLGIAVAISVFKILLHVSRPNTLVLGNIPGTQIFHNINQYTEASRVPSFLILAVESPIYFANSTYIQERIMRWIREEEEHIKANNGNPLKCMILDMTAVTAIDTSGLETLNELRKMLENRSYQLVLANPVGTVMEKLHTSAILDSFGSKGVYLTVGEAVADISSSDKA* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00195 635 Gene3D STAS domain 486 632 IPR036513 -
Rops7g00195 635 PANTHER SULFATE TRANSPORTER 25 629 IPR001902 GO:0016020|GO:0055085
Rops7g00195 635 ProSiteProfiles STAS domain profile. 506 629 IPR002645 -
Rops7g00195 635 Pfam Sulfate permease family 75 454 IPR011547 GO:0016020
Rops7g00195 635 NCBIfam sulfate permease 62 625 IPR001902 GO:0016020|GO:0055085
Rops7g00195 635 CDD STAS_SulP_like_sulfate_transporter 507 622 - -
Rops7g00195 635 ProSitePatterns SLC26A transporters signature. 104 125 IPR018045 GO:0008271|GO:0008272
Rops7g00195 635 FunFam Sulfate transporter 31 486 632 - -
Rops7g00195 635 Pfam STAS domain 507 625 IPR002645 -
Rops7g00195 635 SUPERFAMILY SpoIIaa-like 510 628 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00195 Rops-Chr7 2756806 2761648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00195 9 635 Inorganic Solute Cotransporters AT3G15990 75.439 0.0 994
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00195 K17471 - gmx:100812617 1058.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00195 7 2756806 2761648 Rops7g00195 7 2756806 2761648 ECH
Rops7g00195 7 2756806 2761648 Rops4g02171 4 48156511 48160724 PCT