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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Rops7g00176
ATGTCACCACCACAAAGTGGCATCCACTCATCGGAATCTGAAGCTGTTGATTGTAACTTGAAGGAAACTGAGCTCACCCTTGGCCTTCCCGGTACCAAAACTGGCACAAAACGTGGCTTCTCAGACACCGTTGATCTTCATCTTGGCACCTCAAAGAATGCTTCACCCAAGGCACACGTGGTGGGGTGGCCACCGGTGAGGGCAAGTAGGAAGAATGTGATGAAGAGTTGCAAGTATGTGAAGGTAGCGGTTGATGGAGCTCCATATTTAAGAAAAGTGGATCTTGAAATGTATGAGAGCTATGAGAATCTGCTGAGGGCATTAGAGACCATGTTTGGTTGCTTAACCATTCGTAATCATTCGATGAATGAGAGGAAACTCATGGACCCTGGAAATGGGATTGAATACATGCCCACTTATGAGGACAACGATGGTGATTGGATGTTGGTTGGGGACGTACCATGGAAGATGTTTGTTCAATCGTGCAAGAGGATAAGGCTTATGATTAGCTCAGAGGCCATGGACTTAGGTCCGAAGAATTCTTCCAAATGTACGGGCTCCAGTTAG
567
0.4656
MSPPQSGIHSSESEAVDCNLKETELTLGLPGTKTGTKRGFSDTVDLHLGTSKNASPKAHVVGWPPVRASRKNVMKSCKYVKVAVDGAPYLRKVDLEMYESYENLLRALETMFGCLTIRNHSMNERKLMDPGNGIEYMPTYEDNDGDWMLVGDVPWKMFVQSCKRIRLMISSEAMDLGPKNSSKCTGSS*
189
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Rops7g00176
188
Gene3D
-
71
182
-
-
Rops7g00176
188
FunFam
Auxin-responsive protein
72
180
-
-
Rops7g00176
188
ProSiteProfiles
PB1 domain profile.
77
172
IPR000270
GO:0005515
Rops7g00176
188
PANTHER
AUXIN-RESPONSIVE PROTEIN IAA17
18
173
IPR003311
GO:0005634|GO:0006355
Rops7g00176
188
Pfam
AUX/IAA family
50
179
IPR033389
-
Rops7g00176
188
SUPERFAMILY
CAD & PB1 domains
69
169
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Rops7g00176
Rops-Chr7
2529383
2530867
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Rops7g00176
67
180
B3 DNA Binding Superfamily
AT1G59750
30.702
4.12e-10
56.2
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TR
AUX or IAA
Rops7g00176
AUX_IAA
1.3e-46
CL0072
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Rops7g00176
K14484
-
gmx:100500488
266.544
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Rops7g00176
7
2529383
2530867
Rops7g00176
7
2529383
2530867
ECH
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