Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00174 ATGAAGAAAGAAAAGAGTGTCACTTTGAAAACTGGGGAGGTCCCTGGTAGATTGACTCGTGCTCGAGCAGCTGCTTTTCGTGCATCTGGACAGTTGCCCGCTTTGAAGGGGGTACCACAAGGAAGTCAGAAGCAGCCCATTGGAGCCAATCCAAAAAGAGCAGTTTCAGACAATACATGTCTTCCACGTAAGAAGAGGGCTGTTCTTCAGGATGTGACCAACGTTTGCTGTGAAAATACATACAGGAGCTGTTTCAATGCAACTAAAATTCAGGCTAAGAAAAGCAAGCTGGCTAAGCCTGCTCAACTTAAAGTTTCCAGTGTGGTTTCGTCAGTTGCTATGGAGCTACCACAACTTCAAGTTGACTCAAAAGCAGAGAGTTTGCCACCGATGGGACTTCGATCAGAAGATGTCATGTGCTCAGTTAATTTTGAAGACAATGCACTTCTTCAGCTGAGTGGCAACCAGTGTGGCACAGAAGATAATCAGCTTGAAAGCCAGACATCTGGAATATCTGCTCATCCTTTGATTTCTCAAAAGAAAGCTTCACAAACTGTTGCAGCCAAGAAAGATAGCCTTTCTGAACTTCTGAATGCGTCAAAGGACCCAGATGTCACTGATATAGATGCTGATTTTGATGATCCTCAACTGTGCAGCCTTTATGCTGCTGATATCTATGACAACTTGCGTGTTGCTGAGCTGTCGAGAAGGCCTTATCCTAACTTCATGGAAACAGTACAGAGAGATATCACTCAAAGCATGCGTGGGATACTGGTTGATTGGCTTGTAGAGGTTTCTGAGGAATACAAATTGGGAGCAGACACTCTTTACCTCACTGTATATCTCATAGATTGGTTTCTCTCAAAAAATTACATTGAAAGGCAGAGACTTCAGTTGCTCGGCATTACCTGCATGCTAATTGCCTCGAAGTACGAAGAAATCAATGCCCCACGTATTGAAGAATTCTGCTTCATCACAGACAACACATACACAAAAGAGGAGGTACTAAAAATGGAGACACAAGTGTTGAAGTCCTCTGCATATCAGTTGTTTGCTCCCACTACAAAAACTTTCCTCAGGAGGTTTCTTCGAGCTGCACAAGCTTCTTACAAGAGCCCTAGCTTTGAATTGGAGTACTTGGCCAATTATCTAGCAGAACTTACACTGATGAACTATGGTTTCTTGAATTTCCTTCCATCAATGATTGCTGCATCAGCTGTGTTTCTCGCCAGATGGACTTTAGATCAGTCAAGCCACCCATGGAATCCAACTCTTCAACACTATGCCTCTTACAAAGCATCAGATTTGAAAATCACAGTCCTTGCATTACAGGATCTCCAACTGAATAGCAATGAATGCCCTTTAACTGCAATCCGCACTAAGTACAGACAAGACAAGTTCAAATGTGTAGCAGCTTTGTCTTCACCCAAACTGCTTGAAACTCTGTTCTGA 1452 0.4311 MKKEKSVTLKTGEVPGRLTRARAAAFRASGQLPALKGVPQGSQKQPIGANPKRAVSDNTCLPRKKRAVLQDVTNVCCENTYRSCFNATKIQAKKSKLAKPAQLKVSSVVSSVAMELPQLQVDSKAESLPPMGLRSEDVMCSVNFEDNALLQLSGNQCGTEDNQLESQTSGISAHPLISQKKASQTVAAKKDSLSELLNASKDPDVTDIDADFDDPQLCSLYAADIYDNLRVAELSRRPYPNFMETVQRDITQSMRGILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERQRLQLLGITCMLIASKYEEINAPRIEEFCFITDNTYTKEEVLKMETQVLKSSAYQLFAPTTKTFLRRFLRAAQASYKSPSFELEYLANYLAELTLMNYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKASDLKITVLALQDLQLNSNECPLTAIRTKYRQDKFKCVAALSSPKLLETLF* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00174 483 PANTHER CYCLINS 181 463 IPR039361 -
Rops7g00174 483 SMART cyclin_7 260 344 IPR013763 -
Rops7g00174 483 SMART cyclin_7 357 445 IPR013763 -
Rops7g00174 483 SUPERFAMILY Cyclin-like 353 478 IPR036915 -
Rops7g00174 483 CDD CYCLIN_AtCycA-like_rpt2 353 467 - -
Rops7g00174 483 Gene3D - 224 472 - -
Rops7g00174 483 MobiDBLite consensus disorder prediction 34 55 - -
Rops7g00174 483 SMART Cyclin_C_2 353 476 IPR004367 -
Rops7g00174 483 Pfam Cyclin, C-terminal domain 353 475 IPR004367 -
Rops7g00174 483 SUPERFAMILY Cyclin-like 212 345 IPR036915 -
Rops7g00174 483 Pfam Cyclin, N-terminal domain 224 345 IPR006671 -
Rops7g00174 483 PIRSF Cyclin_A_B_D_E 27 482 IPR046965 GO:0016538|GO:0044772
Rops7g00174 483 CDD CYCLIN_AtCycA_like_rpt1 214 349 - -
Rops7g00174 483 FunFam Mitotic cyclin 6 238 338 - -
Rops7g00174 483 FunFam Cyclin A1 339 472 - -
Rops7g00174 483 Gene3D - 238 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00174 Rops-Chr7 2496184 2502902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00174 1 483 Core Cell Cycle Gene Families AT1G80370 54.209 3.62e-171 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00174 K06627 - gmx:100789757 691.804