Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00163 ATGTCACACCCATCTGTGGCAGATATTGGAGATTTTAAGTGGGGTAGAAAGAGGGGAGTTGGTGCAAAAAATAAAGACATCCAATTCTATGAGTCTTTTGTTTTCGATGGTGTGGAGTACTTTCTGTATGATTGTGTCTACTTTTACCATACAGATCATGTAGAGACTTCTGTTGGTAAGCTTGTGAGGATATATGAGAAACCAAATCATGAAAAGATGGTCAAAGTTGTCTGGTTTTTTCGTCCTACTGAAATTCGTAATTTCTTGGGAAATTATCGGCCAAGTTGGAATGAGTTATTTTTAGCATCTGGTGTGGGAAAAGATCATGTAGAGACTTCTGTTGGTAAGCTTGTGAGGATATATGAGAAACCAAATCATGAAAAGATGTTCAAAGTTGTCTGGTTTTTTCGTCCTACTGAAATTCGTAATTTCTTGGGAAATTATCGGCCAAGTTGGAATGAGTTATTTTTAGCATCTGGTGTGGGAAAAGGTGTTTCCAATGTCAATTATCTGGAATCAATTATTGGAAAATGCAGTGTTGTTTGCACTTCAAAAGACAAGAGAAATCCTAAGCCATCTGAAGCAGAGTTAAAGAGGGCAGATTTCTTTTTCAATTGTACTTTCGATGTTGGAAGGCATGTAATCATTGATAAATTTGCCGATGAGATTGCTGGAGTTAAAGTGGAGCAGTTCTTTAATAGGAGAGGGGATAAGAAAACCAGTGACCATCTGCACGTTGGGACAAATATAAGACCTAAAACTGAGATTGAGACTGGGACCGATCCTTCTGATATCTTGCGCTGTCAAGTTAAAGATAAAGCTGAGGCGAGAACTCCTGTGAATGTCTTGCCAAAAAGATCATTGCATTCATTTCCAGATAAAAAGAGGAAGATTGTAGAAGAGAAGTCTATCATTAGTCAAAGTAACAACTCCCCTAAGGAAGAGGAATTTAATGAGAAGAAAGCAGAACCCAGACAGGATAAAAAAGTCCAAGCACACAGAAAAGTTATTGAGGTGACTGAAAGGCCAGATGCACCTTGGGAGGAAATACTACGGGAAGCTCAAGAGTTGGATACCCTGGTTTTACTGAATAATCTGGATCCATCCTACACGTCATATGAAGTAGAGGATCTTGTTTGGCATGCTCTCAAAGAGAAAGTCAAGGCAAGGATGATAGAATGGAGCCTGACTTCCAATCCTTATTATGGTAGAGCATTGGTTATTTTCAAAACAAAAGATGCAGCCGAATCTGCAATATCTCAGTTGAACAAGAGATGCCTTATTCTAGGAGAAGGGAGGGTTGTCAGTGCCACGAAGGGAACTCTAAGAGAGCCAGGCAAGCAAAGGAAGTTTACTTGTCATTGGGACGTTGACAGATTTGTGTTTCACAAGCAACGCCTACAGAAGAGAAAAGCAGTATCAACATCACATTGTTCACAGCCCAATACAATCGAATACGATATGGCCGTTGAATGGCTGCTGCAAGATCAGAAATCCAATGCATGGTGTAATGTGTTATATCAGAGACAAATGAAGGAGATACAAGACGTGAAGAAAATGGAGAGCCTAAAAACACCTTTGAAGGGTATTGTAAACGATTTAAGGGGAAGAGCGGAGCATTATAAAGATGATTGGACTTCTGGTCTCAGTTCAGGAGCTGGGATATTAGCCCCAACTACCTATATTTTCTTTGCTTCTGCTCTTCCTGTCATTGCATTTGGCGAGCAGCTCAATAGAGATACAGATGGAAGCTTGAGCACAGCAGAAACACTGGCTTCTACAGCCATTTGTGGGATCATACACTCAATTTTGGGTGGCCAGCCTCTCCTAATACTAGGAGTTGCAGAACCCACTATCCTTATGTACACCTATTTGTACAACTTTGCCAAAGATAGGGATGGCTTGGGACGAGAACTCTTTCTGGCTTGGGCAGGATGGGTTTGTGTATGGACTGCTCTCTTGCTGGTTCTTCTAGCAATATTCAATGCCGGCAATATCATCAACAGATTTACAAGGATTGCGGGTGAGCTTTTTAGCATGTTGATCACAGTCTTGTTCATTCAAGAGGCTATCAAGGGAATGGTAGGTGAGTTTAAAGTTCCTAAAGAGGGAGACCCAACATCAGACAAGTACCAATTTCAATGGCTGTATGCAAATGGATTGCTGGGTGTTATATTCACCTTTGGCCTTCTCTGTACTGCTTTAAAAAGCAGAAGAGCAAGGTCATGGTTATATGGAACAGGGTGGTTCAGAAGTTTCATTGCAGACTACGGGGTACCTTTCATGGTGGTAGTGTGGACAGCTCTATCATTCACAGTACCAAGTAAAGTGCCTTCTGGAGTTCCCAGAAGGCTCATTGCTCCTCTTGCTTGGGATTCTACATCTTTACATCATTGGACAGTAATCAAAGATATGGGGAAGGTTTCTCCATCATATATTTTAGCTGCTTTCATTCCTGCCTTAATGGTAGCGGGGCTTTACTTCTTTGACCATAGTGTTGCATCCCAGATGGCACAACAAAAAGAATTCAATCTCGGGAAACCTTCTGCATATCACCATGACATATTGTTGCTAGGATTCATGACTTTGCTTTGTGGATTAATTGGCTTACCCCCTTCAAATGGAGTTCTGCCTCAATCCCCTATGCACACCAAGAGTCTGGCTGTTCTCAAGAAACAGTTGATCAGAAGAAAGATGATTAAAAGTGCCAAGGAAAGCATAAGGCAGAAAGCTAGCAACCCTGAAATCTTTGAGAAGATGCAATCAGTGTTTATAGAAATGGATAGCCTCGCAGATAATGATTCAGTGGACAAAGAGCTAGAGGATTTGAAAGAGGTTGTCCTAAACGGTGAAGATAAAGGAAACAACAATAAGAGTGCATTTGATCCTGAGAAACACATTGATGCATATTTGCCTGTCAGAGTAAAGGAGCAGAGAGTGAGCAATCTTTTACAATCACTCCTTGTAGGAGTATCAGTCTTTGCCATGCCTGCCGTAAAAAAGATACCAACTTCAGTTCTGTGGGGATACTTTGCTTACATGGCTATTGATAGTCTTCCGGGGAATCAATTCTGGGAAAGGATACAACTACTTTTTGTAAGACCTGATAGGTGGTACAAGTTGTTGGAAGGGGATCATGCTTCCTTTGTGGAGTCAGTACCTTACAGATGCATAGTCTTCTTCACATTGTTCCAATGTGTATATTTCTTGATTTGTTTTGGAGTGACATGGATTCCCATAGCTGGAGTGCTATTCCCCTTGCCTTTCTTTTTGCTGATCACATTGAGACAGCATATACTCCCCAAGCTGTTCGATCCATACCATCTCAGTGAACTAGATGCAGCTGAATATGAAGAAATAGCTGGTACTCCAAGACTAAGAAGTTTCAATTTCAATCAATCTTTCAGGGAGGTGGAATCACCCGGAGTTGGATCAAAGGAAATAGGTAATGCTGAAATATTAGATGAGCTAACTACTAACAGAGGGGAGTGGAGAGTCAGAACCTTTAGCTTTAGTGAGGAAAGAAATAGCCAGGTTCATCCTGATGAAAGGGATCCACCTTCACAGAATGTAAGGGAAAGGTGA 3585 0.4114 MSHPSVADIGDFKWGRKRGVGAKNKDIQFYESFVFDGVEYFLYDCVYFYHTDHVETSVGKLVRIYEKPNHEKMVKVVWFFRPTEIRNFLGNYRPSWNELFLASGVGKDHVETSVGKLVRIYEKPNHEKMFKVVWFFRPTEIRNFLGNYRPSWNELFLASGVGKGVSNVNYLESIIGKCSVVCTSKDKRNPKPSEAELKRADFFFNCTFDVGRHVIIDKFADEIAGVKVEQFFNRRGDKKTSDHLHVGTNIRPKTEIETGTDPSDILRCQVKDKAEARTPVNVLPKRSLHSFPDKKRKIVEEKSIISQSNNSPKEEEFNEKKAEPRQDKKVQAHRKVIEVTERPDAPWEEILREAQELDTLVLLNNLDPSYTSYEVEDLVWHALKEKVKARMIEWSLTSNPYYGRALVIFKTKDAAESAISQLNKRCLILGEGRVVSATKGTLREPGKQRKFTCHWDVDRFVFHKQRLQKRKAVSTSHCSQPNTIEYDMAVEWLLQDQKSNAWCNVLYQRQMKEIQDVKKMESLKTPLKGIVNDLRGRAEHYKDDWTSGLSSGAGILAPTTYIFFASALPVIAFGEQLNRDTDGSLSTAETLASTAICGIIHSILGGQPLLILGVAEPTILMYTYLYNFAKDRDGLGRELFLAWAGWVCVWTALLLVLLAIFNAGNIINRFTRIAGELFSMLITVLFIQEAIKGMVGEFKVPKEGDPTSDKYQFQWLYANGLLGVIFTFGLLCTALKSRRARSWLYGTGWFRSFIADYGVPFMVVVWTALSFTVPSKVPSGVPRRLIAPLAWDSTSLHHWTVIKDMGKVSPSYILAAFIPALMVAGLYFFDHSVASQMAQQKEFNLGKPSAYHHDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKKQLIRRKMIKSAKESIRQKASNPEIFEKMQSVFIEMDSLADNDSVDKELEDLKEVVLNGEDKGNNNKSAFDPEKHIDAYLPVRVKEQRVSNLLQSLLVGVSVFAMPAVKKIPTSVLWGYFAYMAIDSLPGNQFWERIQLLFVRPDRWYKLLEGDHASFVESVPYRCIVFFTLFQCVYFLICFGVTWIPIAGVLFPLPFFLLITLRQHILPKLFDPYHLSELDAAEYEEIAGTPRLRSFNFNQSFREVESPGVGSKEIGNAEILDELTTNRGEWRVRTFSFSEERNSQVHPDERDPPSQNVRER* 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00163 1194 Gene3D - 10 108 IPR043151 -
Rops7g00163 1194 PANTHER ANION EXCHANGE PROTEIN 509 1121 IPR003020 GO:0005452|GO:0006820|GO:0016020
Rops7g00163 1194 MobiDBLite consensus disorder prediction 299 330 - -
Rops7g00163 1194 Gene3D - 109 216 IPR043151 -
Rops7g00163 1194 MobiDBLite consensus disorder prediction 1172 1194 - -
Rops7g00163 1194 MobiDBLite consensus disorder prediction 238 262 - -
Rops7g00163 1194 MobiDBLite consensus disorder prediction 313 330 - -
Rops7g00163 1194 FunFam Bromo-adjacent homology (BAH) domain-containing protein 8 109 - -
Rops7g00163 1194 Pfam HCO3- transporter family 719 893 IPR011531 GO:0006820|GO:0016020
Rops7g00163 1194 Pfam HCO3- transporter family 526 699 IPR011531 GO:0006820|GO:0016020
Rops7g00163 1194 Pfam HCO3- transporter family 973 1063 IPR011531 GO:0006820|GO:0016020
Rops7g00163 1194 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 359 442 IPR000504 GO:0003723
Rops7g00163 1194 Gene3D Helical hairpin bin 537 579 - -
Rops7g00163 1194 Pfam BAH domain 112 204 IPR001025 GO:0003682
Rops7g00163 1194 FunFam Bromo-adjacent homology (BAH) domain-containing protein 110 215 - -
Rops7g00163 1194 ProSiteProfiles BAH domain profile. 38 219 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00163 Rops-Chr7 2279406 2297945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00163 518 1183 Antiporters AT1G74810 68.398 0.0 952
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00163 K24194 - gmx:100811184 1170.61