Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00158 ATGACTGCTTCCACCGGAAGAACTACTAGGGTTATTGGTTGGTACCATTCTCATCCTCATATCACAGTTCTCCCTTCCCATGTTGATGTGCGGACTCAGGCAATGTATCAACTTCTCGATTCTGGCTTTATTGGCTTGATTTTTTCCTGTTACAGTGAAGATGCTAACAAGGTAGGAAGAATTCAAGTAATTGCTTTTCAGTCGTCTGACGGGAAGCAGAATCACATGTCAAGACCTATACCTCTTTCTCCTGTAAATATAAGTTCTGTTATTGATATTGATTCATCCCCAAGTTCCTCGGAGAATGTTTCCATAAGATCTGGTTACTTCAAGGCAGAGAGCCCAGAGCAGGACACTGGTGATTCCAGAAGTTCTGGTGCTAGTAAGGGTGGGGGTAGATCTTCGGACTTGGGGAATTTTTTCGCTAATGCTGATGCCAACTATCAAGGGAGAGAAAAAGGTGGTGGAAACTACCATCTCAACAATTCAGACACCAGCATACCTGATGTTGATCCCATGGATATGTCAGAAAGTATGCAGGAAGCTATGCATCGTTCAAATTTGGACATGAGTGGTGCAGAGTATGTACGAAAAGAAATTCCCCTTTATGTTTTGCCAGCCTTGTCTCTTGTCAACCTTGATTCACCACTACTATCATACACGGATCTGCAACATGTACTATTTGAAGAGGAGCGGACTGCATATAATCAAGCCATCTTACAAAATATGAGGGATGGGAAAGTGCATCCGCTCACTTTCATACACCACACTTCAACTTATCAGGCTTCCTTGTGCAAATTGATTGAATATTGTTTAAGTCCTGCAATAAATGCACTTCAAGATCGACTGAGAGAGAATGAAATTCGGTTAGCAGTTCTGAGTGACGAAGCCAAGAGTCTGGAGGCTGAGGCATCTAGAGGGAGTGCAGCAAGTTTAGGATCTCCCCGTCAGGTACATCGAGGAAGTTCCTCTCCTAGTTCGAAGAATGTAGCTAGTCCTGATTGGAGTCATAACTTGGTGGGCATCGACAGTTCATGTGCTTTTGATCATAATCAGAGGCCACACAGAGCAAGCCAACCTGGTTGGCAAGCAATAAAGAAGCTATGTACAGAGCATGGAGAAGTTCAACTCCACCACTTCCACCTCTTATGCAGCCTAGGATGCGGGAGTGTTGGAAATGTTTTCCTCTGCGAGATTAAAAAATCTTTGAAGCCACACCCCAATTGCTATTATGCCATGAAAGTAGTGGACACAAAATCTCTGATGTTGAAAAATAAGCTGAAGAGGGCAGAGATGGAGAAGGAAGTGATGAGTTTGCTTGACCACCCTTTTTTGCCAACCCTTTATGCTAAGTTTGATGCTTATCAACACTCATGTTTGGTCATGGATTACTGCCCTGGTGGTGACTTGTTTACACTTCAGCAGCACCAGTCAGATTTTCATTTTAGCATCTCCACTACAAGATTCTTTGCAGCTGAGGTGCTTCTTGCTCTTGAGTATCTCCACATGATGGGGATAATTTATAGAGACCTCAAACCTGAAAATGTGCTCATTCAAGAAGATGGCCATATCATGCTAACTGACTTTGATCTCTCTCTTCACTTGGAAGTTCATCCCAAGCTTCTGAAACGTAGGCATGAGTATGAGGTTATGACCAAGAGAATAAAGAAGTCAATGTTCTGTTGCAGGAATTCAGATGAGGATATTAAAAGGACTAAGAAGAAAGCAGCCATTGCAGATGGAATGCTACTACCTACAGAAGGAGCACAAGGAGTGAACATTGAAATCTCAGCTGAACCCATGAATAGTAGATCACATTCATTTGTTGGGACTCATGAATATCTGGCACCAGAGATGATTATGGGGTTAGGCCATGGAAGTGCAATTGATTGGTGGGCATTTGGTGTGTTTCTTTATGAGCTATTATTTGGATTTACACCTTTTAGAGACACAAGCAATGAGAAAACAATGAATAATATCATGGGGCAGTCATTAACCTTCCCAAGAACTGATTCTAGAGACAGAGAAGAAGATTGTGAGGAGATTGCAAAGGCAGAGGACCTTATAAGGAAGCTATTGGTGAGAAACCCCAGAAAGAGAATGGGATTCAACACTGGATCTTGTGAGATTAAAAAACATGAGTTCTTTGAGGGGGTGAACTGGGCCTTAATCAGATCAGTTAAACCTCCTTTTACTCCTAGAACTTTGCATGAAAAGCAAACCTCATTTACCATAGCAAAGGATAAAGCTGCAATACAAGGCCTTCATCAAATTGACTTCTTCTGA 2286 0.4221 MTASTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDSGFIGLIFSCYSEDANKVGRIQVIAFQSSDGKQNHMSRPIPLSPVNISSVIDIDSSPSSSENVSIRSGYFKAESPEQDTGDSRSSGASKGGGRSSDLGNFFANADANYQGREKGGGNYHLNNSDTSIPDVDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLYVLPALSLVNLDSPLLSYTDLQHVLFEEERTAYNQAILQNMRDGKVHPLTFIHHTSTYQASLCKLIEYCLSPAINALQDRLRENEIRLAVLSDEAKSLEAEASRGSAASLGSPRQVHRGSSSPSSKNVASPDWSHNLVGIDSSCAFDHNQRPHRASQPGWQAIKKLCTEHGEVQLHHFHLLCSLGCGSVGNVFLCEIKKSLKPHPNCYYAMKVVDTKSLMLKNKLKRAEMEKEVMSLLDHPFLPTLYAKFDAYQHSCLVMDYCPGGDLFTLQQHQSDFHFSISTTRFFAAEVLLALEYLHMMGIIYRDLKPENVLIQEDGHIMLTDFDLSLHLEVHPKLLKRRHEYEVMTKRIKKSMFCCRNSDEDIKRTKKKAAIADGMLLPTEGAQGVNIEISAEPMNSRSHSFVGTHEYLAPEMIMGLGHGSAIDWWAFGVFLYELLFGFTPFRDTSNEKTMNNIMGQSLTFPRTDSRDREEDCEEIAKAEDLIRKLLVRNPRKRMGFNTGSCEIKKHEFFEGVNWALIRSVKPPFTPRTLHEKQTSFTIAKDKAAIQGLHQIDFF* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00158 761 ProSiteProfiles Protein kinase domain profile. 380 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00158 761 Pfam BRCC36 C-terminal helical domain 217 300 IPR040749 -
Rops7g00158 761 SUPERFAMILY JAB1/MPN domain 6 54 - -
Rops7g00158 761 Gene3D Transferase(Phosphotransferase) domain 1 601 734 - -
Rops7g00158 761 Coils Coil 276 303 - -
Rops7g00158 761 ProSiteProfiles AGC-kinase C-terminal domain profile. 717 761 IPR000961 GO:0004674|GO:0005524|GO:0006468
Rops7g00158 761 ProSiteProfiles MPN domain profile. 1 72 IPR037518 -
Rops7g00158 761 MobiDBLite consensus disorder prediction 304 332 - -
Rops7g00158 761 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 6 40 IPR000555 GO:0005515|GO:0008233|GO:0008237
Rops7g00158 761 SUPERFAMILY Protein kinase-like (PK-like) 363 739 IPR011009 -
Rops7g00158 761 MobiDBLite consensus disorder prediction 110 135 - -
Rops7g00158 761 Gene3D Phosphorylase Kinase; domain 1 378 464 - -
Rops7g00158 761 PANTHER FLIPPASE KINASE 1-RELATED 285 738 - -
Rops7g00158 761 SMART serkin_6 380 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00158 761 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672|GO:0006468
Rops7g00158 761 Gene3D Cytidine Deaminase, domain 2 1 85 - -
Rops7g00158 761 FunFam Serine/threonine-protein kinase OXI1 469 537 - -
Rops7g00158 761 MobiDBLite consensus disorder prediction 310 332 - -
Rops7g00158 761 Gene3D Transferase(Phosphotransferase) domain 1 465 534 - -
Rops7g00158 761 Pfam Protein kinase domain 604 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00158 761 Pfam Protein kinase domain 382 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00158 Rops-Chr7 2222951 2230534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00158 350 734 AGC Kinase Gene Family AT2G26700 47.597 1.81e-132 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Rops7g00158 Pkinase 6.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00158 K11864 - gmx:100784991 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00158 7 2222951 2230534 Rops7g00158 7 2222951 2230534 ECH