Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00126 ATGGCTTTTTTCCGAATCTTTTGTTGCGGAAATGCTTCGGATCGCAAAGCACGAGGGAAGAAACAACCTCCATGGCGGGTGTTTTCTTTGAAGGAATTACACTCAGCTACAAATAATTTCAACTATGATAACAAGCTGGGTGAAGGGGGATTTGGCAGTGTGTACTGGGGCCAGCTTTGGGATGGATCGCAAATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACAAAGCTGACATGGAATTTGCTGTTGAAGTTGAGATACTGGCAAGAGTACGACACAAGAATCTTCTTAGTTTGCGTGGCTATTGTGCTGAAGAATGCCTTCTTGATTGGAATCGACGGATGAATATTGCAATCGGGGCTGCTGAGGGAATTGTATATCTTCACCACCAAGCGACACCACATATCATTCACAGAGATATTAAAGCAAGCAATGTGTTGTTGGATTCAGATTTCCAAGCACAGGTTGCTGATTTTGGTTTTGCCAAGTTGATCCCTGATGGGGCAACACATGTGACTACAAGAGTGAAGGGCACCCTTGGCTACCTTGCACCAGAATATGCTATGTTAGGTAAAGCAAATGAGAGTTGTGATGTCTACAGTTTTGGGATTCTCCTTCTAGAACTAGCTAGTGGCAAAAAACCACTTGAAAAACTTAGTTCTGCAGTGAAGCGATCAATAAATGATTGGGCACTTCCATTGGCTTGTGAGAAGAAATTTAGTGAACTTGCAGATCCAAGACTTAATGGTAACTATGTGGAGGAGGAGCATAGAAGAGTTATTTTAGTTGCTCTCATATGTGCTCAGAGTCAGCCTGAGAAGAGACCCACCATGCTTGAGGTGGTAGAGCTACTGAAGGGAGAGTCCAAAGACAAGCTTTCTCAGTTGGAGAATAATGAACTCTTTAAGAACCCTCCAGTTGGAGGAAATAATGATGGGATATCAGCTGCTGAAGGCAGTTCGGACTTCATCTCAGAGGAGAAGGAACCAAGACATGAGTTGGAAGAGAGTACAGAGCCATGA 1023 0.434 MAFFRIFCCGNASDRKARGKKQPPWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEECLLDWNRRMNIAIGAAEGIVYLHHQATPHIIHRDIKASNVLLDSDFQAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELASGKKPLEKLSSAVKRSINDWALPLACEKKFSELADPRLNGNYVEEEHRRVILVALICAQSQPEKRPTMLEVVELLKGESKDKLSQLENNELFKNPPVGGNNDGISAAEGSSDFISEEKEPRHELEESTEP* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00126 340 MobiDBLite consensus disorder prediction 296 340 - -
Rops7g00126 340 SUPERFAMILY Protein kinase-like (PK-like) 22 285 IPR011009 -
Rops7g00126 340 Coils Coil 279 299 - -
Rops7g00126 340 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Rops7g00126 340 Pfam Protein kinase domain 41 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00126 340 Pfam Protein kinase domain 115 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00126 340 PANTHER OS01G0253100 PROTEIN 21 291 - -
Rops7g00126 340 FunFam PTI1-like tyrosine-protein kinase At3g15890 92 301 - -
Rops7g00126 340 ProSiteProfiles Protein kinase domain profile. 40 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00126 340 SMART serkin_6 40 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00126 340 Gene3D Transferase(Phosphotransferase) domain 1 106 290 - -
Rops7g00126 340 MobiDBLite consensus disorder prediction 322 340 - -
Rops7g00126 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Rops7g00126 340 Gene3D Phosphorylase Kinase; domain 1 10 105 - -
Rops7g00126 340 FunFam PTI1-like tyrosine-protein kinase At3g15890 12 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00126 Rops-Chr7 1783434 1786842 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00126 9 288 Trihelix Transcription Factor Family AT1G70460 46.429 1.13e-81 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Rops7g00126 Pkinase 2.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00126 - - gmx:100788153 616.305